Click here to switch to the map view.

The map label for this gene is WrbA [H]

Identifier: 39995910

GI number: 39995910

Start: 863562

End: 864173

Strand: Reverse

Name: WrbA [H]

Synonym: GSU0804

Alternate gene names: 39995910

Gene position: 864173-863562 (Counterclockwise)

Preceding gene: 39995911

Following gene: 39995909

Centisome position: 22.66

GC content: 66.01

Gene sequence:

>612_bases
ATGAACGTACTCATTGTCTACTATTCCATGTACGGCCACATCCATCGTATGGCCGAAGCCGTGGCCGAGGGGGTCCGCGA
GGTGCCCGGCGCCGAGGCGGTGCTCCGCCGCGTGCCAGAAACGCTGTCGCCCGACGTGCTCGAAAAGATGGGCGCCGTCG
AGCCCCAGAAGGCCTTTGCCCACATTCCGGTGGCCACGGTGGACGAGCTTGCCTCGGCAGACGCCATCATCTTCGGCACG
CCCACCCGCTTCGGCAACATGTGCGGCCAGATGCGCCAGTTTCTGGATGCCACCGGCGGGCTCTGGGTGAAAGGCTCCCT
CGTGGGCAAGGCCGCCGGCGTCTTTACCAGTTCCGCCACCCAGCACGGGGGCCAGGAATCCACAATCCTCACCTTCCACA
CCTTCCTCCTCCATCAGGGGATGGTCATCGTGGGCCTTCCCTATGCCTTTGCCGGCCAGACGCGGATCGACGAAATCACC
GGCGGCTCCCCCTACGGCGCCTCCACCATCGCCGGCGGCCAGGGGGAACGGCTGCCGAGCGAGAACGATCTGGCCGGGGC
CCGCTTCCAGGGCAGGTATGTGGCGCAGATCGCCGCCAAACTGAACGGATAG

Upstream 100 bases:

>100_bases
CGCCGGTTCTGACCCTCTCCCCGCCGCTTCGTTGCATCCCCGCCGGATTGCGATACGCTTTTTCCTGCTGGTCACCACTG
CCGTCAGGAGGAGCTTTGTC

Downstream 100 bases:

>100_bases
GAAGCACAGGGAGGTTCTTCCATGTCCTGGATTCGCTGGTTCTCGGAAATAACCATTGATGACGTCCCCCTGGTCGGGGG
CAAGAACGCCTCCCTCGGCG

Product: TrpR binding protein WrbA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNVLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFAHIPVATVDELASADAIIFGT
PTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSATQHGGQESTILTFHTFLLHQGMVIVGLPYAFAGQTRIDEIT
GGSPYGASTIAGGQGERLPSENDLAGARFQGRYVAQIAAKLNG

Sequences:

>Translated_203_residues
MNVLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFAHIPVATVDELASADAIIFGT
PTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSATQHGGQESTILTFHTFLLHQGMVIVGLPYAFAGQTRIDEIT
GGSPYGASTIAGGQGERLPSENDLAGARFQGRYVAQIAAKLNG
>Mature_203_residues
MNVLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFAHIPVATVDELASADAIIFGT
PTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSATQHGGQESTILTFHTFLLHQGMVIVGLPYAFAGQTRIDEIT
GGSPYGASTIAGGQGERLPSENDLAGARFQGRYVAQIAAKLNG

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787239, Length=202, Percent_Identity=58.9108910891089, Blast_Score=223, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6319849, Length=203, Percent_Identity=47.7832512315271, Blast_Score=169, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6320235, Length=201, Percent_Identity=44.7761194029851, Blast_Score=156, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6319526, Length=200, Percent_Identity=33, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 21480; Mature: 21480

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH
HIPVATVDELASADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSAT
HCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCHH
QHGGQESTILTFHTFLLHQGMVIVGLPYAFAGQTRIDEITGGSPYGASTIAGGQGERLPS
HCCCCCCHHHHHHHHHHHCCEEEEECCHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
ENDLAGARFQGRYVAQIAAKLNG
CCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNVLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHH
HIPVATVDELASADAIIFGTPTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSAT
HCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCHH
QHGGQESTILTFHTFLLHQGMVIVGLPYAFAGQTRIDEITGGSPYGASTIAGGQGERLPS
HCCCCCCHHHHHHHHHHHCCEEEEECCHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
ENDLAGARFQGRYVAQIAAKLNG
CCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA