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The map label for this gene is hyfE [C]

Identifier: 39995847

GI number: 39995847

Start: 786946

End: 787587

Strand: Direct

Name: hyfE [C]

Synonym: GSU0741

Alternate gene names: 39995847

Gene position: 786946-787587 (Clockwise)

Preceding gene: 39995846

Following gene: 39995848

Centisome position: 20.63

GC content: 64.49

Gene sequence:

>642_bases
ATGGTTTCCCTTGCCGACCAACTGCTGGTGCTGGTCATGCTGATCAACTTCGTCGTCCTGGGGTCGAGCCGGATGGCCTT
CTGCATCCGGGCCGCCGCCGTGCAGGGGGTGATCCTGGGGGTGCTCCCCGGCATCATCCACTCCTTCTCCTGGCACCTGG
TGGCCATCTCCGGCGGGATCATCCTGGCCAAGGGACTGGTGATCCCCTGGCTGATCAGCGATGCCGTGCGCAAGGCCCGG
ATCAAGCGGGAGGTGGAGCCGTTCATCGGCTACGTGCCGACCCTGATCCTGGGCGCCGTGGCCACGGCCTTGGCCTTTGT
CTTCTCGGAGCGGCTCCCCCTGGCCCCGGAGCACCAGGACCTGCTCTTCGTGCCGGCGGCCATCGCCACCCTGATGACCG
GGTTCCTGGTGCTGACCACCCGACGCAAGGCCATCTCCCAGGTGATCGGCTACCTGGTTCTGGAAAACGGCATCTTCATT
TTCAGCCTGCTGTTGACCACCGCCATGCCGGTCATGGTGGAGGCCGGAGTGCTCCTGGACCTTCTGGTGGGGATCTTCGT
CATGGGAATCGTCATTAACCACATCAGCCGCGAGTTCTCCTCCGTCGACACCTCGCGCCTGAGCGCCCTGAAGGAGGAGT
AG

Upstream 100 bases:

>100_bases
ATCGGTCATGGCCCGGCTGCGCCTGATCCGCATCCCGCAACTGCTTGTGGCGGCGACAATCCTCTCCGCCTTTTCCATGC
TCCTGATCCTGAGGTAACCC

Downstream 100 bases:

>100_bases
GCCCATGCTGACCGCCGCCGTTCTCCTGCCGCTCGTAGGCGCCCTCGTGGCCTGGATCGTCCCGGACAACCGGCTCCGCC
CCCTGGTGCTGCCGGCTGTG

Product: NAD-dependent dehydrogenase subunit

Products: H2; oxidized ferredoxin [C]

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MVSLADQLLVLVMLINFVVLGSSRMAFCIRAAAVQGVILGVLPGIIHSFSWHLVAISGGIILAKGLVIPWLISDAVRKAR
IKREVEPFIGYVPTLILGAVATALAFVFSERLPLAPEHQDLLFVPAAIATLMTGFLVLTTRRKAISQVIGYLVLENGIFI
FSLLLTTAMPVMVEAGVLLDLLVGIFVMGIVINHISREFSSVDTSRLSALKEE

Sequences:

>Translated_213_residues
MVSLADQLLVLVMLINFVVLGSSRMAFCIRAAAVQGVILGVLPGIIHSFSWHLVAISGGIILAKGLVIPWLISDAVRKAR
IKREVEPFIGYVPTLILGAVATALAFVFSERLPLAPEHQDLLFVPAAIATLMTGFLVLTTRRKAISQVIGYLVLENGIFI
FSLLLTTAMPVMVEAGVLLDLLVGIFVMGIVINHISREFSSVDTSRLSALKEE
>Mature_213_residues
MVSLADQLLVLVMLINFVVLGSSRMAFCIRAAAVQGVILGVLPGIIHSFSWHLVAISGGIILAKGLVIPWLISDAVRKAR
IKREVEPFIGYVPTLILGAVATALAFVFSERLPLAPEHQDLLFVPAAIATLMTGFLVLTTRRKAISQVIGYLVLENGIFI
FSLLLTTAMPVMVEAGVLLDLLVGIFVMGIVINHISREFSSVDTSRLSALKEE

Specific function: Unknown

COG id: COG4237

COG function: function code C; Hydrogenase 4 membrane component (E)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 22991; Mature: 22991

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLADQLLVLVMLINFVVLGSSRMAFCIRAAAVQGVILGVLPGIIHSFSWHLVAISGGI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH
ILAKGLVIPWLISDAVRKARIKREVEPFIGYVPTLILGAVATALAFVFSERLPLAPEHQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LLFVPAAIATLMTGFLVLTTRRKAISQVIGYLVLENGIFIFSLLLTTAMPVMVEAGVLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LLVGIFVMGIVINHISREFSSVDTSRLSALKEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSLADQLLVLVMLINFVVLGSSRMAFCIRAAAVQGVILGVLPGIIHSFSWHLVAISGGI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH
ILAKGLVIPWLISDAVRKARIKREVEPFIGYVPTLILGAVATALAFVFSERLPLAPEHQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LLFVPAAIATLMTGFLVLTTRRKAISQVIGYLVLENGIFIFSLLLTTAMPVMVEAGVLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LLVGIFVMGIVINHISREFSSVDTSRLSALKEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton; reduced ferredoxin [C]

Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]