| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is mmpL5 [H]
Identifier: 39995795
GI number: 39995795
Start: 727698
End: 730397
Strand: Direct
Name: mmpL5 [H]
Synonym: GSU0689
Alternate gene names: 39995795
Gene position: 727698-730397 (Clockwise)
Preceding gene: 39995790
Following gene: 39995796
Centisome position: 19.08
GC content: 64.3
Gene sequence:
>2700_bases ATGCAGCACACAAACGACAGAAAACGGTTTACGGGACTTTTCGGCGTCGTCGCCCGCCATCCGCGCCTCGTTCTCGGGGT GTCACTCCTGCTGGCAGTGCTTTCGGTGCTCTATACCTGGCAGGAGATGAGCTTCCTGACCGGCCGCGACGACCTGATGC CGAAAAATGCGCCGTTCCAGCAGGACTACCGGGCAAACCGGGCGGAATTCGGCGACCGCGAAGAGATCGTCGTGGTGGTC GAGAGCGGCGATCAGGCCAGGGCATCGGGCTTTGCCGAACGCCTGGCCGCGGACCTCTCGGCCGATCGGACGCGCTTTCG CGATGTCTTTCACCCCAACGGTCTTCCGTTTTTCCGGGAGCACGGCCTGTTGCTCCTTCCCCTGGACGAGCTGCGGTCGC TCCGAGAAAACCTTACCCTGGCCGAGCCGGTGCTGAAGGATCTCGCCTCAACGCCGTCGGTCCAGACCCTCTTTACCCAT CTTACCACACGCATGGACGTTTACACGGCGGCGGACGATTCTTCCGCCGGCCGCGACCGGGAACGGGCGGGACTCGTCTT TATGCTCGACAAGCTGGGCAGCGGCATTGCCTCCTTTGGCGGCGGCAAGGGCTCCTTTTCCCTTGAAGAGGTCTTCCTCG GTGGGGACTCGGCTCTGGCCCGGGCCCAGCGGATGCAGATAGTGACGGTCAGGCCGGTGCGCGACGCTGCCAGTTTTGTT CCGGCCGAGGAGGCGATCCGCGTGGTCCGCGCCCGGGTGGCTGAGCTCAAGGCACGTCCCGAGTTCGCCGGCGTGACCGT TGGGCTCACCGGCACGCCGGTTCTGGAGTACGAGGAGATGGCAACCAGCGAGCGGGACATCACCCTGGCAACGGGTCTCT CCCTGGCCCTGACCGTGGTCCTCCTGCTGGCGGCCTTCCGGGGGGTGCTGAACGTGGCGGCCGCCATGGTTTCCCTGGTG GTGGCCATCTGCGTCTCCTTCGGCGTGGCGACCCTGGTGGTCGGGCACCTGAACATCCTTTCCATGGTCTTTGCGGTCAT GCTGATCGGCATCGGCATCGAGTACGGCATCCAGGTGGTGCTCCGCTACCAGGAAGAGCTGGGGCTCGGGGCCGGTGAAC TGGAGGCCGTGAACACGGGGCTCAGCCGGAACATGCTCGCCATTGTCATGGCCGCCGCCACCACGGCAGCGGCGTTTTTC ACCTTCGCCTTCACCGATTTCCGGGGAATTGCCGAGCTGGGGATCATCGCCTCCCTCGGCATTGCCGTCTGCGTGGCCGT TACCTTCACCACCCTGCCCGCGGCCCTGGTCCTTCTCGTGCCGCTGCGCAAAACGAGGGAGACCGAGCGAGAAGCCCGGG CCGCCGGCCTGCTGAGGCGCTCACCCCGGTTCGCACGGCTGGAGGCGTTTCTCTTCGGCCATCCGCGGATCGTCGTGGGG ATCACTGTTCTGCTCTGCCTCGCTTCGCTCTATCCGCTGGCCGATACCCGCTTCGACTACAATCTCCTTAACCTGCAGGC CCGGGGGCTCGAGTCGGTGGAGTATGCCTACAAGCTGATGAAAAGCAGGGAGAATGCGGGCTACTTCGCCGAAGTGACCG CTGCGACGCCGGCCGAGGCCAGGATGCTCACGGCCCGCCTGGAGCAGTTGCCGACGGTCGACCACGTGGTGAGCCTCCTT ACGTTCGTCCCCGACGATCAGGATGCCAAGCTCCGGGAACTGGCCGTGCTGCGGGATGAACTGGCCGATGTGAACCCGGT TCCCTACGAGGAGGATCTGCGGGTCATGGAACTCCCCACGGTGTTCGAGAATTTCCGTACCTCCGTGGAGCGGTTCAAGG TGCGGCTCGAGGCGGAGAAGAGGCCCGAGGCTGTTCGGGTGGGGGCCTTCCTCGCCACCCTTGATCGTTTCTTCGCTGAC CTTGAGAAAGAAAAGGACCGCAATGCCCTCGGCATGCTCCGGGATTTCCAGGGGGGGATGCTCGCCTCGTTCCCGGAACA GATCCAGCAGCTCAAGGCAAGCCTCGCAGTCCGTCCGGTAACCGAGGCGGACGTGCCTCAGCAGCTCAGGGAGCGCTTCG TGGGGAAAAGCGGCACGTATCTGCTCCAGGTGGCGCCCCGGCAGGAGATTTTCGAGCGCGAGCCACTGAAGCGGTTCCTG GACCAGGTTCGCAGCGTGGCGCCCCGGGCCAACGGCGAGCCGGTTATGGTCTACGAATCCATGACCATCATGCGCGACGC CTACTTGCGGGCGTTCGTCTACGCCTTCGGTGCAATCGTGCTGATCCTGTTCATTACCTTCCGCAGTCTAGTCTATACCC TGGTGGGGCTCGTGCCGCTGGTGGTGGGAATGCTCCTCATGGTGGGGGGGATGTGGCTGGCCGGCATTCCCTTCAACTCT GCCAATATCATCGTGCTGCCGCTTATCCTCGGCATTGCCGTGGATTCGGGGATCTACATCATCAACCGCTTCCGCCGGGA AGAGGGGGACGCTGCCTCGGTCATCATGAGCAGCACCGGCCTGGGCGTCATCTACAATACACTCACCATCATGGCGAGCT TCGGCGCGCTCATGGTGGCCCGCCACCAAGGGGTCTTCAGCATCGGGGCGGTCATGAGCCTGGGCATGGTGGCCTGCCAG GCCGCGTTCATCCTGGTGCTGCCGGCGGTGTTGACGCTGGTGGGGAAGCGTAGTGACTAG
Upstream 100 bases:
>100_bases TGCAACGGCTGCCGCCGCTCCAGAGCTGCGGCACGAGACGATTGCACCCATCGGGGGGGCTATGGTATCGTGCCAAGGTT TTGACGTGTGGGGAGGATTC
Downstream 100 bases:
>100_bases GGGGCTCAGCGGTGCGGTCCCGCTGGCGCACTTTTTCCTGCGCGAACGGGTGAAGCCGGGGGACCGGGTGGTCGACGCCA CCTGCGGCAACGGCCATGAT
Product: SecD/SecF family protein export membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 899; Mature: 899
Protein sequence:
>899_residues MQHTNDRKRFTGLFGVVARHPRLVLGVSLLLAVLSVLYTWQEMSFLTGRDDLMPKNAPFQQDYRANRAEFGDREEIVVVV ESGDQARASGFAERLAADLSADRTRFRDVFHPNGLPFFREHGLLLLPLDELRSLRENLTLAEPVLKDLASTPSVQTLFTH LTTRMDVYTAADDSSAGRDRERAGLVFMLDKLGSGIASFGGGKGSFSLEEVFLGGDSALARAQRMQIVTVRPVRDAASFV PAEEAIRVVRARVAELKARPEFAGVTVGLTGTPVLEYEEMATSERDITLATGLSLALTVVLLLAAFRGVLNVAAAMVSLV VAICVSFGVATLVVGHLNILSMVFAVMLIGIGIEYGIQVVLRYQEELGLGAGELEAVNTGLSRNMLAIVMAAATTAAAFF TFAFTDFRGIAELGIIASLGIAVCVAVTFTTLPAALVLLVPLRKTRETEREARAAGLLRRSPRFARLEAFLFGHPRIVVG ITVLLCLASLYPLADTRFDYNLLNLQARGLESVEYAYKLMKSRENAGYFAEVTAATPAEARMLTARLEQLPTVDHVVSLL TFVPDDQDAKLRELAVLRDELADVNPVPYEEDLRVMELPTVFENFRTSVERFKVRLEAEKRPEAVRVGAFLATLDRFFAD LEKEKDRNALGMLRDFQGGMLASFPEQIQQLKASLAVRPVTEADVPQQLRERFVGKSGTYLLQVAPRQEIFEREPLKRFL DQVRSVAPRANGEPVMVYESMTIMRDAYLRAFVYAFGAIVLILFITFRSLVYTLVGLVPLVVGMLLMVGGMWLAGIPFNS ANIIVLPLILGIAVDSGIYIINRFRREEGDAASVIMSSTGLGVIYNTLTIMASFGALMVARHQGVFSIGAVMSLGMVACQ AAFILVLPAVLTLVGKRSD
Sequences:
>Translated_899_residues MQHTNDRKRFTGLFGVVARHPRLVLGVSLLLAVLSVLYTWQEMSFLTGRDDLMPKNAPFQQDYRANRAEFGDREEIVVVV ESGDQARASGFAERLAADLSADRTRFRDVFHPNGLPFFREHGLLLLPLDELRSLRENLTLAEPVLKDLASTPSVQTLFTH LTTRMDVYTAADDSSAGRDRERAGLVFMLDKLGSGIASFGGGKGSFSLEEVFLGGDSALARAQRMQIVTVRPVRDAASFV PAEEAIRVVRARVAELKARPEFAGVTVGLTGTPVLEYEEMATSERDITLATGLSLALTVVLLLAAFRGVLNVAAAMVSLV VAICVSFGVATLVVGHLNILSMVFAVMLIGIGIEYGIQVVLRYQEELGLGAGELEAVNTGLSRNMLAIVMAAATTAAAFF TFAFTDFRGIAELGIIASLGIAVCVAVTFTTLPAALVLLVPLRKTRETEREARAAGLLRRSPRFARLEAFLFGHPRIVVG ITVLLCLASLYPLADTRFDYNLLNLQARGLESVEYAYKLMKSRENAGYFAEVTAATPAEARMLTARLEQLPTVDHVVSLL TFVPDDQDAKLRELAVLRDELADVNPVPYEEDLRVMELPTVFENFRTSVERFKVRLEAEKRPEAVRVGAFLATLDRFFAD LEKEKDRNALGMLRDFQGGMLASFPEQIQQLKASLAVRPVTEADVPQQLRERFVGKSGTYLLQVAPRQEIFEREPLKRFL DQVRSVAPRANGEPVMVYESMTIMRDAYLRAFVYAFGAIVLILFITFRSLVYTLVGLVPLVVGMLLMVGGMWLAGIPFNS ANIIVLPLILGIAVDSGIYIINRFRREEGDAASVIMSSTGLGVIYNTLTIMASFGALMVARHQGVFSIGAVMSLGMVACQ AAFILVLPAVLTLVGKRSD >Mature_899_residues MQHTNDRKRFTGLFGVVARHPRLVLGVSLLLAVLSVLYTWQEMSFLTGRDDLMPKNAPFQQDYRANRAEFGDREEIVVVV ESGDQARASGFAERLAADLSADRTRFRDVFHPNGLPFFREHGLLLLPLDELRSLRENLTLAEPVLKDLASTPSVQTLFTH LTTRMDVYTAADDSSAGRDRERAGLVFMLDKLGSGIASFGGGKGSFSLEEVFLGGDSALARAQRMQIVTVRPVRDAASFV PAEEAIRVVRARVAELKARPEFAGVTVGLTGTPVLEYEEMATSERDITLATGLSLALTVVLLLAAFRGVLNVAAAMVSLV VAICVSFGVATLVVGHLNILSMVFAVMLIGIGIEYGIQVVLRYQEELGLGAGELEAVNTGLSRNMLAIVMAAATTAAAFF TFAFTDFRGIAELGIIASLGIAVCVAVTFTTLPAALVLLVPLRKTRETEREARAAGLLRRSPRFARLEAFLFGHPRIVVG ITVLLCLASLYPLADTRFDYNLLNLQARGLESVEYAYKLMKSRENAGYFAEVTAATPAEARMLTARLEQLPTVDHVVSLL TFVPDDQDAKLRELAVLRDELADVNPVPYEEDLRVMELPTVFENFRTSVERFKVRLEAEKRPEAVRVGAFLATLDRFFAD LEKEKDRNALGMLRDFQGGMLASFPEQIQQLKASLAVRPVTEADVPQQLRERFVGKSGTYLLQVAPRQEIFEREPLKRFL DQVRSVAPRANGEPVMVYESMTIMRDAYLRAFVYAFGAIVLILFITFRSLVYTLVGLVPLVVGMLLMVGGMWLAGIPFNS ANIIVLPLILGIAVDSGIYIINRFRREEGDAASVIMSSTGLGVIYNTLTIMASFGALMVARHQGVFSIGAVMSLGMVACQ AAFILVLPAVLTLVGKRSD
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 98479; Mature: 98479
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHTNDRKRFTGLFGVVARHPRLVLGVSLLLAVLSVLYTWQEMSFLTGRDDLMPKNAPFQ CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QDYRANRAEFGDREEIVVVVESGDQARASGFAERLAADLSADRTRFRDVFHPNGLPFFRE HHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HGLLLLPLDELRSLRENLTLAEPVLKDLASTPSVQTLFTHLTTRMDVYTAADDSSAGRDR CCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCH ERAGLVFMLDKLGSGIASFGGGKGSFSLEEVFLGGDSALARAQRMQIVTVRPVRDAASFV HHCCCEEEHHHHCCCHHHCCCCCCCCCHHHHEECCCHHHHHHHHEEEEEECCHHHHHHHC PAEEAIRVVRARVAELKARPEFAGVTVGLTGTPVLEYEEMATSERDITLATGLSLALTVV CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHH LLLAAFRGVLNVAAAMVSLVVAICVSFGVATLVVGHLNILSMVFAVMLIGIGIEYGIQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LRYQEELGLGAGELEAVNTGLSRNMLAIVMAAATTAAAFFTFAFTDFRGIAELGIIASLG HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVCVAVTFTTLPAALVLLVPLRKTRETEREARAAGLLRRSPRFARLEAFLFGHPRIVVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHH ITVLLCLASLYPLADTRFDYNLLNLQARGLESVEYAYKLMKSRENAGYFAEVTAATPAEA HHHHHHHHHHCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH RMLTARLEQLPTVDHVVSLLTFVPDDQDAKLRELAVLRDELADVNPVPYEEDLRVMELPT HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCEEEEHHH VFENFRTSVERFKVRLEAEKRPEAVRVGAFLATLDRFFADLEKEKDRNALGMLRDFQGGM HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH LASFPEQIQQLKASLAVRPVTEADVPQQLRERFVGKSGTYLLQVAPRQEIFEREPLKRFL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH DQVRSVAPRANGEPVMVYESMTIMRDAYLRAFVYAFGAIVLILFITFRSLVYTLVGLVPL HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGMLLMVGGMWLAGIPFNSANIIVLPLILGIAVDSGIYIINRFRREEGDAASVIMSSTG HHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCC LGVIYNTLTIMASFGALMVARHQGVFSIGAVMSLGMVACQAAFILVLPAVLTLVGKRSD CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQHTNDRKRFTGLFGVVARHPRLVLGVSLLLAVLSVLYTWQEMSFLTGRDDLMPKNAPFQ CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QDYRANRAEFGDREEIVVVVESGDQARASGFAERLAADLSADRTRFRDVFHPNGLPFFRE HHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH HGLLLLPLDELRSLRENLTLAEPVLKDLASTPSVQTLFTHLTTRMDVYTAADDSSAGRDR CCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCH ERAGLVFMLDKLGSGIASFGGGKGSFSLEEVFLGGDSALARAQRMQIVTVRPVRDAASFV HHCCCEEEHHHHCCCHHHCCCCCCCCCHHHHEECCCHHHHHHHHEEEEEECCHHHHHHHC PAEEAIRVVRARVAELKARPEFAGVTVGLTGTPVLEYEEMATSERDITLATGLSLALTVV CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHH LLLAAFRGVLNVAAAMVSLVVAICVSFGVATLVVGHLNILSMVFAVMLIGIGIEYGIQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LRYQEELGLGAGELEAVNTGLSRNMLAIVMAAATTAAAFFTFAFTDFRGIAELGIIASLG HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVCVAVTFTTLPAALVLLVPLRKTRETEREARAAGLLRRSPRFARLEAFLFGHPRIVVG HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHH ITVLLCLASLYPLADTRFDYNLLNLQARGLESVEYAYKLMKSRENAGYFAEVTAATPAEA HHHHHHHHHHCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH RMLTARLEQLPTVDHVVSLLTFVPDDQDAKLRELAVLRDELADVNPVPYEEDLRVMELPT HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCEEEEHHH VFENFRTSVERFKVRLEAEKRPEAVRVGAFLATLDRFFADLEKEKDRNALGMLRDFQGGM HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH LASFPEQIQQLKASLAVRPVTEADVPQQLRERFVGKSGTYLLQVAPRQEIFEREPLKRFL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH DQVRSVAPRANGEPVMVYESMTIMRDAYLRAFVYAFGAIVLILFITFRSLVYTLVGLVPL HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGMLLMVGGMWLAGIPFNSANIIVLPLILGIAVDSGIYIINRFRREEGDAASVIMSSTG HHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCC LGVIYNTLTIMASFGALMVARHQGVFSIGAVMSLGMVACQAAFILVLPAVLTLVGKRSD CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]