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The map label for this gene is ytqB [H]

Identifier: 39995796

GI number: 39995796

Start: 730390

End: 730959

Strand: Direct

Name: ytqB [H]

Synonym: GSU0690

Alternate gene names: 39995796

Gene position: 730390-730959 (Clockwise)

Preceding gene: 39995795

Following gene: 39995799

Centisome position: 19.15

GC content: 70.53

Gene sequence:

>570_bases
GTGACTAGGGGGCTCAGCGGTGCGGTCCCGCTGGCGCACTTTTTCCTGCGCGAACGGGTGAAGCCGGGGGACCGGGTGGT
CGACGCCACCTGCGGCAACGGCCATGATACCCTCTTTCTCGCGGAGCTGGTGGGGCCGGAGGGACGGGTCTGGGCGTTCG
ATATTCAGGATGCGGCCCTGGCCGCCACGGCGAAGCGGTTGGAAGCGGCCGGATGCGGGGAGCGGGTGGAGCTGGTCAAC
GGCGGTCACGAACGGCTGGCGGAACTGGTGCCCGGTCCGGTGACCGCCGTGGTGTTCAACTTGGGGTTTCTGCCCGGCGC
GGAGAACGGCACGATCACCACCCCGGCAACCACCGGCGCGGCCCTGGACCAGGCGACGGAACTACTCCTGCCCGGCGGCA
TCGTTACGGTGGCGGTCTACACCGGCCATCCCGGCGGGCCGGAAGAGGAGGCAGCCGTGGATGCCTGGGCAGCCTCCCTG
CCGCCGGCACGTTTCAATGTCTGGCGCTGCCGCCAGGGCAACCGTTCGTCCGCCGCGCCCTACCTGGTGGTGGCTGAGTG
CCGCGCCTGA

Upstream 100 bases:

>100_bases
GTCTTCAGCATCGGGGCGGTCATGAGCCTGGGCATGGTGGCCTGCCAGGCCGCGTTCATCCTGGTGCTGCCGGCGGTGTT
GACGCTGGTGGGGAAGCGTA

Downstream 100 bases:

>100_bases
GCGCCCCTCCCTTTACCCTCCGGCCCGCTTGACGATGAATCCCCGCCGCGTGAGCTCGGCTACCAGAAGGTCGGCGTGAT
CGCCCTGGATCTCCACGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTRGLSGAVPLAHFFLRERVKPGDRVVDATCGNGHDTLFLAELVGPEGRVWAFDIQDAALAATAKRLEAAGCGERVELVN
GGHERLAELVPGPVTAVVFNLGFLPGAENGTITTPATTGAALDQATELLLPGGIVTVAVYTGHPGGPEEEAAVDAWAASL
PPARFNVWRCRQGNRSSAAPYLVVAECRA

Sequences:

>Translated_189_residues
MTRGLSGAVPLAHFFLRERVKPGDRVVDATCGNGHDTLFLAELVGPEGRVWAFDIQDAALAATAKRLEAAGCGERVELVN
GGHERLAELVPGPVTAVVFNLGFLPGAENGTITTPATTGAALDQATELLLPGGIVTVAVYTGHPGGPEEEAAVDAWAASL
PPARFNVWRCRQGNRSSAAPYLVVAECRA
>Mature_188_residues
TRGLSGAVPLAHFFLRERVKPGDRVVDATCGNGHDTLFLAELVGPEGRVWAFDIQDAALAATAKRLEAAGCGERVELVNG
GHERLAELVPGPVTAVVFNLGFLPGAENGTITTPATTGAALDQATELLLPGGIVTVAVYTGHPGGPEEEAAVDAWAASLP
PARFNVWRCRQGNRSSAAPYLVVAECRA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 19680; Mature: 19549

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGLSGAVPLAHFFLRERVKPGDRVVDATCGNGHDTLFLAELVGPEGRVWAFDIQDAAL
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCHHHH
AATAKRLEAAGCGERVELVNGGHERLAELVPGPVTAVVFNLGFLPGAENGTITTPATTGA
HHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEECCCCCCH
ALDQATELLLPGGIVTVAVYTGHPGGPEEEAAVDAWAASLPPARFNVWRCRQGNRSSAAP
HHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
YLVVAECRA
EEEEEECCC
>Mature Secondary Structure 
TRGLSGAVPLAHFFLRERVKPGDRVVDATCGNGHDTLFLAELVGPEGRVWAFDIQDAAL
CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCHHHH
AATAKRLEAAGCGERVELVNGGHERLAELVPGPVTAVVFNLGFLPGAENGTITTPATTGA
HHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEECCCCCCH
ALDQATELLLPGGIVTVAVYTGHPGGPEEEAAVDAWAASLPPARFNVWRCRQGNRSSAAP
HHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC
YLVVAECRA
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]