| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is nadE [H]
Identifier: 39995758
GI number: 39995758
Start: 682713
End: 683534
Strand: Direct
Name: nadE [H]
Synonym: GSU0652
Alternate gene names: 39995758
Gene position: 682713-683534 (Clockwise)
Preceding gene: 39995757
Following gene: 39995759
Centisome position: 17.9
GC content: 58.03
Gene sequence:
>822_bases ATGGGTGGGCTCATGGTTAATGCTGCGCTGCTGCGTCAAGTGTTGGTTGGCTTCCTGCGGGAAGAAGTCCACAAGGTGGG CGTGCGCAAGGCGGTACTGGGATTATCGGGCGGCATCGACTCCGCTCTGGTCGCATTCCTTGCCGCCGAGGCACTCGGCC CCGACAATGTGCACGCCATCATCATGCCCTACCGGACGAGCAATCCCGAGAGCGAAGCCCATGCCCGCCTTGTCGCCGAG CAGCTGGGGATCAATCATGAGGTGATAGAAATAACGCCCATGGTAGATGCCTACTTCACCCGCTTCCCCGATGCGGACAA CATGCGCCGCGGTAACAAAATGGCCCGTGAGCGGATGACAATCCTCTATGACCATTCCGCCGCTCTTGGGGCTCTTGTTC TCGGTACCAGCAACAAGACCGAACTTCTGCTCGGCTATGGAACGCTTTACGGCGATATGGCGAGCGCTCTCAACCCGATC GGCGACATATACAAAACACAGGTCTGGCAGCTCTCCGAGACGATGGGAGTTCCGCGGCAGATTATCGAAAAGAAGCCGTC GGCCGATCTCTGGGCCGGCCAGACCGATGAGCAGGAGCTTGGCTTCACGTATCGTGAGGTTGATGAACTTCTCTACTGCA TGATCGATCTCCGCATGAATCGTCTCGAGCTGCTTGCGCGCGGCTTTGTGGCAGATTTTATCGACACGGTGAGTGGCAAG GTGCAGAATTCCCACTTCAAGCGGCGGCTGCCCGTCATCGCCAAGGTCTCCAACCGCACCATCGATCGCGATTTCCGCTA TTCACGCGATTGGGGCAAGTGA
Upstream 100 bases:
>100_bases CTTTGCGCCGCGAACGGATTTTTTCGCCGATGATGCGGGACGAGAGCCTCTTGATTACCCTGAGCGAATTGCGCCGAATC GAGCGGGAGAGGGGACGCTG
Downstream 100 bases:
>100_bases CGCGCATTCCGCGTCCGCAGCAGCGTTCCCGTGCCAGGCATCCTGTACATCATCGCGACTCCCATCGGCAACCTTGAGGA TATCACCTACCGGGCAGTCC
Product: NAD synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MGGLMVNAALLRQVLVGFLREEVHKVGVRKAVLGLSGGIDSALVAFLAAEALGPDNVHAIIMPYRTSNPESEAHARLVAE QLGINHEVIEITPMVDAYFTRFPDADNMRRGNKMARERMTILYDHSAALGALVLGTSNKTELLLGYGTLYGDMASALNPI GDIYKTQVWQLSETMGVPRQIIEKKPSADLWAGQTDEQELGFTYREVDELLYCMIDLRMNRLELLARGFVADFIDTVSGK VQNSHFKRRLPVIAKVSNRTIDRDFRYSRDWGK
Sequences:
>Translated_273_residues MGGLMVNAALLRQVLVGFLREEVHKVGVRKAVLGLSGGIDSALVAFLAAEALGPDNVHAIIMPYRTSNPESEAHARLVAE QLGINHEVIEITPMVDAYFTRFPDADNMRRGNKMARERMTILYDHSAALGALVLGTSNKTELLLGYGTLYGDMASALNPI GDIYKTQVWQLSETMGVPRQIIEKKPSADLWAGQTDEQELGFTYREVDELLYCMIDLRMNRLELLARGFVADFIDTVSGK VQNSHFKRRLPVIAKVSNRTIDRDFRYSRDWGK >Mature_272_residues GGLMVNAALLRQVLVGFLREEVHKVGVRKAVLGLSGGIDSALVAFLAAEALGPDNVHAIIMPYRTSNPESEAHARLVAEQ LGINHEVIEITPMVDAYFTRFPDADNMRRGNKMARERMTILYDHSAALGALVLGTSNKTELLLGYGTLYGDMASALNPIG DIYKTQVWQLSETMGVPRQIIEKKPSADLWAGQTDEQELGFTYREVDELLYCMIDLRMNRLELLARGFVADFIDTVSGKV QNSHFKRRLPVIAKVSNRTIDRDFRYSRDWGK
Specific function: This NAD Synthase Uses Nh(3) In Preference To Glutamine. [C]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD synthetase family [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=246, Percent_Identity=28.8617886178862, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788036, Length=214, Percent_Identity=28.5046728971963, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR022926 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: =6.3.1.5 [H]
Molecular weight: Translated: 30501; Mature: 30369
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLMVNAALLRQVLVGFLREEVHKVGVRKAVLGLSGGIDSALVAFLAAEALGPDNVHAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE IMPYRTSNPESEAHARLVAEQLGINHEVIEITPMVDAYFTRFPDADNMRRGNKMARERMT EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILYDHSAALGALVLGTSNKTELLLGYGTLYGDMASALNPIGDIYKTQVWQLSETMGVPRQ HEEECCHHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IIEKKPSADLWAGQTDEQELGFTYREVDELLYCMIDLRMNRLELLARGFVADFIDTVSGK HHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VQNSHFKRRLPVIAKVSNRTIDRDFRYSRDWGK HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GGLMVNAALLRQVLVGFLREEVHKVGVRKAVLGLSGGIDSALVAFLAAEALGPDNVHAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE IMPYRTSNPESEAHARLVAEQLGINHEVIEITPMVDAYFTRFPDADNMRRGNKMARERMT EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILYDHSAALGALVLGTSNKTELLLGYGTLYGDMASALNPIGDIYKTQVWQLSETMGVPRQ HEEECCHHHHEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IIEKKPSADLWAGQTDEQELGFTYREVDELLYCMIDLRMNRLELLARGFVADFIDTVSGK HHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VQNSHFKRRLPVIAKVSNRTIDRDFRYSRDWGK HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA