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The map label for this gene is arnC [H]

Identifier: 39995730

GI number: 39995730

Start: 660358

End: 661308

Strand: Direct

Name: arnC [H]

Synonym: GSU0623

Alternate gene names: 39995730

Gene position: 660358-661308 (Clockwise)

Preceding gene: 39995729

Following gene: 39995731

Centisome position: 17.31

GC content: 61.83

Gene sequence:

>951_bases
GTGGAACTGAGTATCGTTGTTCCGATCTACAATGAGGAAGAGACTATTCCGCATCTTCATGCGCGGGTGAGCGACGCCCT
GGTCGGGTCAGGCATCGACTACGAGCTGATTCTCGTGGATGACGGCTCCTCTGACGGCTCGTTCGCCCTGCTGCGGGAGA
TTGCCCAACAAGACCGGCGGGTGAAGGTGATCCGCTTCCGCCGCAACTTCGGCCAGACCGCCGCCATGGCGGCCGGCTTC
GATGCCGCCCGGGGAAGGGTCATCGTGCCCATGGACGGCGACCTCCAGAACGACCCGGCTGACATTCCGATGCTCCTGGC
CACGATCGACGAGGGGTACGACGTGGTCTCGGGCTGGCGCAAGGACCGGCAGGACACCTTCGTCAACCGGCGCCTTCCCT
CCATTATCGCAAATGCGCTCATCTCCCGGATGACAGGGGTTCACCTCCACGATTACGGCTGCACCCTGAAGGCCTACCGG
CGCGAAGTGCTGGACGGGGTCAATCTGTACGGAGAGATGCACCGGTTCGTCCCCGCCCTGGCCTCCCAGGTGGGGGCGCG
GGTGACGGAGATACCGGTCCGCCACCATGCCCGCCTCTATGGCACGAGCAAATACGGCATTTCCCGTACCATGCGCGTCG
TTCTGGACCTGATGACGGTGAAGTTCCTGCTCACCTATTCCACCAAGCCGATCCAGCTCTTCGGCAAGTGGGGCATCTAT
ACCATCCTGGCCGGGTTCCTGACCGGCGGGCTTACCCTCTCTATGAAACTCTTCGAGGGGATGAGCATGAACCGCAATCC
CCTGCTGATCCTGACCGCCTTTCTCCTCTTCGGAGGGGTGCAGTTCATCGCCCTCGGGCTGCTGGGAGAGGTGAACGCCC
GAACCTACCACGAGTCCCAGGGGAAACCGATTTACGTCGTCCGGGAGAAAATCAACCTGGATGAAAGGTAG

Upstream 100 bases:

>100_bases
GCGCCATGGAGTACCCGGACGAAGCCGCCGAGGTCAGGCTCTATCTGCCTGTCCTGCGGCAGCGTCAGGCAGTGCAGAAG
CAACATCAGTGAGGTGCCCG

Downstream 100 bases:

>100_bases
GGGGGCGGCGCCGTGAGGATTCTCATGCTGGCCCCCACGCCGTTTTTCGCCGACCGCGGGTGCCACGTCAGGATTTACGA
AGAGGCCCGGACGCTCATTG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MELSIVVPIYNEEETIPHLHARVSDALVGSGIDYELILVDDGSSDGSFALLREIAQQDRRVKVIRFRRNFGQTAAMAAGF
DAARGRVIVPMDGDLQNDPADIPMLLATIDEGYDVVSGWRKDRQDTFVNRRLPSIIANALISRMTGVHLHDYGCTLKAYR
REVLDGVNLYGEMHRFVPALASQVGARVTEIPVRHHARLYGTSKYGISRTMRVVLDLMTVKFLLTYSTKPIQLFGKWGIY
TILAGFLTGGLTLSMKLFEGMSMNRNPLLILTAFLLFGGVQFIALGLLGEVNARTYHESQGKPIYVVREKINLDER

Sequences:

>Translated_316_residues
MELSIVVPIYNEEETIPHLHARVSDALVGSGIDYELILVDDGSSDGSFALLREIAQQDRRVKVIRFRRNFGQTAAMAAGF
DAARGRVIVPMDGDLQNDPADIPMLLATIDEGYDVVSGWRKDRQDTFVNRRLPSIIANALISRMTGVHLHDYGCTLKAYR
REVLDGVNLYGEMHRFVPALASQVGARVTEIPVRHHARLYGTSKYGISRTMRVVLDLMTVKFLLTYSTKPIQLFGKWGIY
TILAGFLTGGLTLSMKLFEGMSMNRNPLLILTAFLLFGGVQFIALGLLGEVNARTYHESQGKPIYVVREKINLDER
>Mature_316_residues
MELSIVVPIYNEEETIPHLHARVSDALVGSGIDYELILVDDGSSDGSFALLREIAQQDRRVKVIRFRRNFGQTAAMAAGF
DAARGRVIVPMDGDLQNDPADIPMLLATIDEGYDVVSGWRKDRQDTFVNRRLPSIIANALISRMTGVHLHDYGCTLKAYR
REVLDGVNLYGEMHRFVPALASQVGARVTEIPVRHHARLYGTSKYGISRTMRVVLDLMTVKFLLTYSTKPIQLFGKWGIY
TILAGFLTGGLTLSMKLFEGMSMNRNPLLILTAFLLFGGVQFIALGLLGEVNARTYHESQGKPIYVVREKINLDER

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=233, Percent_Identity=29.6137339055794, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI1788588, Length=312, Percent_Identity=39.1025641025641, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1788692, Length=308, Percent_Identity=27.9220779220779, Blast_Score=142, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI71999402, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325441, Length=112, Percent_Identity=33.9285714285714, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24585265, Length=229, Percent_Identity=28.3842794759825, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 35333; Mature: 35333

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00079 MULTICOPPER_OXIDASE1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSIVVPIYNEEETIPHLHARVSDALVGSGIDYELILVDDGSSDGSFALLREIAQQDRR
CCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC
VKVIRFRRNFGQTAAMAAGFDAARGRVIVPMDGDLQNDPADIPMLLATIDEGYDVVSGWR
EEEEEEHHHCCCHHHHHCCCHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHH
KDRQDTFVNRRLPSIIANALISRMTGVHLHDYGCTLKAYRREVLDGVNLYGEMHRFVPAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQVGARVTEIPVRHHARLYGTSKYGISRTMRVVLDLMTVKFLLTYSTKPIQLFGKWGIY
HHHHCCCEEECCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH
TILAGFLTGGLTLSMKLFEGMSMNRNPLLILTAFLLFGGVQFIALGLLGEVNARTYHESQ
HHHHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCC
GKPIYVVREKINLDER
CCEEEEEEEECCCCCC
>Mature Secondary Structure
MELSIVVPIYNEEETIPHLHARVSDALVGSGIDYELILVDDGSSDGSFALLREIAQQDRR
CCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC
VKVIRFRRNFGQTAAMAAGFDAARGRVIVPMDGDLQNDPADIPMLLATIDEGYDVVSGWR
EEEEEEHHHCCCHHHHHCCCHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHH
KDRQDTFVNRRLPSIIANALISRMTGVHLHDYGCTLKAYRREVLDGVNLYGEMHRFVPAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQVGARVTEIPVRHHARLYGTSKYGISRTMRVVLDLMTVKFLLTYSTKPIQLFGKWGIY
HHHHCCCEEECCHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH
TILAGFLTGGLTLSMKLFEGMSMNRNPLLILTAFLLFGGVQFIALGLLGEVNARTYHESQ
HHHHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCC
GKPIYVVREKINLDER
CCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA