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The map label for this gene is 39995729

Identifier: 39995729

GI number: 39995729

Start: 658850

End: 660349

Strand: Direct

Name: 39995729

Synonym: GSU0622

Alternate gene names: NA

Gene position: 658850-660349 (Clockwise)

Preceding gene: 39995728

Following gene: 39995730

Centisome position: 17.27

GC content: 62.8

Gene sequence:

>1500_bases
ATGACGGCATCGCCGCTGCCGCACAAGCGCATCCTGCTCGTCTTTTTTCTTCTGGTGACCGTGACGGTCTACGGGAACAC
CTTTTTCAACCAGTGGACCTATGACGATATCCCCGTTGTCCTGAAGAATCCCGATGCCCACTCGCTTGCCGGTTTTGCCC
GGAACACGATGCCCGGCCGCCCCATACGCGAGCTCACCTACATCCCCGACCATCTCCTGTTCGGCGACCAGCCCGCCGGC
TATCGCATCCAGCAGCTGGCCTGGCACGGAGTGAACGGACTGTTGCTGGTCGCCCTTTTCCACGCCCTGGGGGTAGAGCT
TCCCTTTGCCCTCATGGGGGCGCTCCTCTTCCTGGTGCATCCCCTCCAGTCCGAGTCGGTGGCCGGCATCGCGCACCGCA
AGGAGTTGCTGGCCCTGTTCTTTGCCCTCGGTGCCGTGCTCTGTTTCGTGGGGAGTTTCGCCGCCGCCGGGGGGCGGCGC
CTTGCCTTGTGGCTCGCTGCTCTTGCCGCGTACGGTGGCGCACTCCTTGCCAATGAGGCCACGGTGACGCTGCCGCTCGT
GGCTCTCCTCTACGAATGGCTGATGGTTGAACCAAGAAAAAGGGTGCTGCTCAGGCGTCCCCTCGTGACACTTCTCTTCC
TCGTGGCGGCCGGTGCGGCGCTCATGTACCGGTTCCGGGGGCTCCTGGCACCTGAACATCTGCTCACGGTCTATTCCAAG
AACAGCTTTGGTGCTTCGGAGAACTATCTTCCCCTCTTCATGGGTGCCATGAAGGCCTTCGGATTCTATCTCTCCAAGAT
CGTTCTCCCGGTCCGCCTAGCCCCCGAGTATGTATTCCGACTCTCCGAAAGCCTCTGGCAACCGTGGGCGTTGCTGTCGC
TCGGGCTCCTTGCGTCAGTGGCAAGCGCGACGGTCTTTCTCCGTCGCCGGCTTCCCCTGGTATCGTTCGGTATCGGCTGG
TTCCTCATTTTCTGGCTGCCGGTTTCCAACCTGGTTCCCGTGGCCTACCTGGCGGCGGACCGGTACATGTACCTCTGCCT
TCCCGGCGTTGGGCTCGTCCTGGCGGGGTGCCTCCAACGCTGGCCCCACCGGAGATTTGTCGGCGCCTCCTGCCTCGTGA
TTGTTGTGTTCGCCGGGCTCACCGTGATACAAAACGGGTACTGGCGCAGCGAACATACCCTCTGGCGGCATGCAGTCACG
GTCAATCCCGACTCTACCTGGGTGCGCGAGACGGTGGGGCTGAGTTACCTGCTGACGGGGGATTACAACCAGGCGGCGGC
GCATGCGCGGGAGGCGCTACGGATCGACCGGTTCAATATCCGGGCGTACCTGACCCTGGCCAAGGCCGAGGAACGGCGCG
GCAATCTGGCCGAGGCGGTGCTCAATTACGAGATGTTCGCCATGTTCGGCGCCATGGAGTACCCGGACGAAGCCGCCGAG
GTCAGGCTCTATCTGCCTGTCCTGCGGCAGCGTCAGGCAGTGCAGAAGCAACATCAGTGA

Upstream 100 bases:

>100_bases
GGTCCGGTGGCGGGGAAACCGCGCCGGTCACGATCCGTTGCGTCAAGGAGTTCGGCACTCCTTGGCATCTGCCTGCCCAC
GGTCCCAGGGAGGTCCCGCG

Downstream 100 bases:

>100_bases
GGTGCCCGGTGGAACTGAGTATCGTTGTTCCGATCTACAATGAGGAAGAGACTATTCCGCATCTTCATGCGCGGGTGAGC
GACGCCCTGGTCGGGTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MTASPLPHKRILLVFFLLVTVTVYGNTFFNQWTYDDIPVVLKNPDAHSLAGFARNTMPGRPIRELTYIPDHLLFGDQPAG
YRIQQLAWHGVNGLLLVALFHALGVELPFALMGALLFLVHPLQSESVAGIAHRKELLALFFALGAVLCFVGSFAAAGGRR
LALWLAALAAYGGALLANEATVTLPLVALLYEWLMVEPRKRVLLRRPLVTLLFLVAAGAALMYRFRGLLAPEHLLTVYSK
NSFGASENYLPLFMGAMKAFGFYLSKIVLPVRLAPEYVFRLSESLWQPWALLSLGLLASVASATVFLRRRLPLVSFGIGW
FLIFWLPVSNLVPVAYLAADRYMYLCLPGVGLVLAGCLQRWPHRRFVGASCLVIVVFAGLTVIQNGYWRSEHTLWRHAVT
VNPDSTWVRETVGLSYLLTGDYNQAAAHAREALRIDRFNIRAYLTLAKAEERRGNLAEAVLNYEMFAMFGAMEYPDEAAE
VRLYLPVLRQRQAVQKQHQ

Sequences:

>Translated_499_residues
MTASPLPHKRILLVFFLLVTVTVYGNTFFNQWTYDDIPVVLKNPDAHSLAGFARNTMPGRPIRELTYIPDHLLFGDQPAG
YRIQQLAWHGVNGLLLVALFHALGVELPFALMGALLFLVHPLQSESVAGIAHRKELLALFFALGAVLCFVGSFAAAGGRR
LALWLAALAAYGGALLANEATVTLPLVALLYEWLMVEPRKRVLLRRPLVTLLFLVAAGAALMYRFRGLLAPEHLLTVYSK
NSFGASENYLPLFMGAMKAFGFYLSKIVLPVRLAPEYVFRLSESLWQPWALLSLGLLASVASATVFLRRRLPLVSFGIGW
FLIFWLPVSNLVPVAYLAADRYMYLCLPGVGLVLAGCLQRWPHRRFVGASCLVIVVFAGLTVIQNGYWRSEHTLWRHAVT
VNPDSTWVRETVGLSYLLTGDYNQAAAHAREALRIDRFNIRAYLTLAKAEERRGNLAEAVLNYEMFAMFGAMEYPDEAAE
VRLYLPVLRQRQAVQKQHQ
>Mature_498_residues
TASPLPHKRILLVFFLLVTVTVYGNTFFNQWTYDDIPVVLKNPDAHSLAGFARNTMPGRPIRELTYIPDHLLFGDQPAGY
RIQQLAWHGVNGLLLVALFHALGVELPFALMGALLFLVHPLQSESVAGIAHRKELLALFFALGAVLCFVGSFAAAGGRRL
ALWLAALAAYGGALLANEATVTLPLVALLYEWLMVEPRKRVLLRRPLVTLLFLVAAGAALMYRFRGLLAPEHLLTVYSKN
SFGASENYLPLFMGAMKAFGFYLSKIVLPVRLAPEYVFRLSESLWQPWALLSLGLLASVASATVFLRRRLPLVSFGIGWF
LIFWLPVSNLVPVAYLAADRYMYLCLPGVGLVLAGCLQRWPHRRFVGASCLVIVVFAGLTVIQNGYWRSEHTLWRHAVTV
NPDSTWVRETVGLSYLLTGDYNQAAAHAREALRIDRFNIRAYLTLAKAEERRGNLAEAVLNYEMFAMFGAMEYPDEAAEV
RLYLPVLRQRQAVQKQHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17560436, Length=518, Percent_Identity=23.7451737451737, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55786; Mature: 55655

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASPLPHKRILLVFFLLVTVTVYGNTFFNQWTYDDIPVVLKNPDAHSLAGFARNTMPGR
CCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCC
PIRELTYIPDHLLFGDQPAGYRIQQLAWHGVNGLLLVALFHALGVELPFALMGALLFLVH
CHHHHHCCCCHHEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
PLQSESVAGIAHRKELLALFFALGAVLCFVGSFAAAGGRRLALWLAALAAYGGALLANEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
TVTLPLVALLYEWLMVEPRKRVLLRRPLVTLLFLVAAGAALMYRFRGLLAPEHLLTVYSK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEC
NSFGASENYLPLFMGAMKAFGFYLSKIVLPVRLAPEYVFRLSESLWQPWALLSLGLLASV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ASATVFLRRRLPLVSFGIGWFLIFWLPVSNLVPVAYLAADRYMYLCLPGVGLVLAGCLQR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
WPHRRFVGASCLVIVVFAGLTVIQNGYWRSEHTLWRHAVTVNPDSTWVRETVGLSYLLTG
CCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHCCEEEEEC
DYNQAAAHAREALRIDRFNIRAYLTLAKAEERRGNLAEAVLNYEMFAMFGAMEYPDEAAE
CCHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHH
VRLYLPVLRQRQAVQKQHQ
EEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TASPLPHKRILLVFFLLVTVTVYGNTFFNQWTYDDIPVVLKNPDAHSLAGFARNTMPGR
CCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCC
PIRELTYIPDHLLFGDQPAGYRIQQLAWHGVNGLLLVALFHALGVELPFALMGALLFLVH
CHHHHHCCCCHHEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC
PLQSESVAGIAHRKELLALFFALGAVLCFVGSFAAAGGRRLALWLAALAAYGGALLANEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
TVTLPLVALLYEWLMVEPRKRVLLRRPLVTLLFLVAAGAALMYRFRGLLAPEHLLTVYSK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEC
NSFGASENYLPLFMGAMKAFGFYLSKIVLPVRLAPEYVFRLSESLWQPWALLSLGLLASV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ASATVFLRRRLPLVSFGIGWFLIFWLPVSNLVPVAYLAADRYMYLCLPGVGLVLAGCLQR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
WPHRRFVGASCLVIVVFAGLTVIQNGYWRSEHTLWRHAVTVNPDSTWVRETVGLSYLLTG
CCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHCCEEEEEC
DYNQAAAHAREALRIDRFNIRAYLTLAKAEERRGNLAEAVLNYEMFAMFGAMEYPDEAAE
CCHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHH
VRLYLPVLRQRQAVQKQHQ
EEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA