Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39995593

Identifier: 39995593

GI number: 39995593

Start: 515708

End: 516445

Strand: Direct

Name: 39995593

Synonym: GSU0485

Alternate gene names: NA

Gene position: 515708-516445 (Clockwise)

Preceding gene: 308513281

Following gene: 39995596

Centisome position: 13.52

GC content: 62.74

Gene sequence:

>738_bases
TTGTCCGCTGTAAACCCCCTGCCCATGAGCCTTCAGCCATGTCGAAAAGCTTTGATGATCTTCGCCAAAAGACCGATGGC
CGGCCGGGTGAAGACACGGCTGACCCCCCCCCTCTCTCCCGGGGATGCCGCTGAGCTCTACCGGCGGATGCTGCTGGATA
TCCTTGCGAAGTGTGCCCGAATGGTCGGCGTGGATCTCCTGCTCTTCTACGAGCCCGGGGAAGGAAGCGGCCGTTTCTTT
GAAGAGGCGGCTCCGGGGTGGGCATGTCGTCCCCAGGAGGGGGGTGATCTGGGGGCGCGGCTCGATTCGGCCTTTCGGCT
TGCTTTCGGTGAAGGGTATGGTGAAGTTGCCGTGATCGGTACCGACTCCCCCGACCTGCCTGAAGAGTATGTGCGGCTGG
CGTTCGATCTGTTGGACCACCGGGCGGTGGACGCGGTCTATGGTCCCTCTGAAGATGGCGGTTACTACCTCCTGGCTCTG
AAGCAACACCGGCCGGAGCTTTTCCGCGATATCCCCTGGTCCACCGGGGAGGTCCTGGAGCACTCGCTGGCTCGAGCCAA
GGCGGTAGGCGTGCGGGTCGAGCTCCTCCCTGTCTGGTATGATGTGGATAGCATCGCCGATCTGTGGCGTCCGGGGCTGG
CCGGGGCCGGCACCGTGGCACCACTTACGGCGGAATTCGTTTCCGGCCTTATTTCAGCACATCCACCAGATACCCCACCC
CCTGCAGGTGAGAGATAA

Upstream 100 bases:

>100_bases
ACTCACGCACGTTCCTTGTTAATACGCGCCGAAGCGGCTGACGACATCCCGTGTGGATAACTATGTGGAAAACCCCCAAA
GTTGTGGATAACGCTAGCCG

Downstream 100 bases:

>100_bases
CCTCCTGAATGTGCTCGAACCCCCGGGTCTCCAGCTCGATGAGGACCTCGGTCTTGCCGATGGGGAGCGATTTCGAGCGC
CGGTCATGGGTGATGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCARMVGVDLLLFYEPGEGSGRFF
EEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIGTDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLAL
KQHRPELFRDIPWSTGEVLEHSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP
PAGER

Sequences:

>Translated_245_residues
MSAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCARMVGVDLLLFYEPGEGSGRFF
EEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIGTDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLAL
KQHRPELFRDIPWSTGEVLEHSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP
PAGER
>Mature_244_residues
SAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCARMVGVDLLLFYEPGEGSGRFFE
EAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIGTDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLALK
QHRPELFRDIPWSTGEVLEHSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPPP
AGER

Specific function: Unknown

COG id: COG3222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26599; Mature: 26468

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCAR
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MVGVDLLLFYEPGEGSGRFFEEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIG
HHCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
TDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLALKQHRPELFRDIPWSTGEVLE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHH
HSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP
HHHHHHHHHCEEEEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PAGER
CCCCC
>Mature Secondary Structure 
SAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCAR
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MVGVDLLLFYEPGEGSGRFFEEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIG
HHCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
TDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLALKQHRPELFRDIPWSTGEVLE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHH
HSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP
HHHHHHHHHCEEEEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PAGER
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA