| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995593
Identifier: 39995593
GI number: 39995593
Start: 515708
End: 516445
Strand: Direct
Name: 39995593
Synonym: GSU0485
Alternate gene names: NA
Gene position: 515708-516445 (Clockwise)
Preceding gene: 308513281
Following gene: 39995596
Centisome position: 13.52
GC content: 62.74
Gene sequence:
>738_bases TTGTCCGCTGTAAACCCCCTGCCCATGAGCCTTCAGCCATGTCGAAAAGCTTTGATGATCTTCGCCAAAAGACCGATGGC CGGCCGGGTGAAGACACGGCTGACCCCCCCCCTCTCTCCCGGGGATGCCGCTGAGCTCTACCGGCGGATGCTGCTGGATA TCCTTGCGAAGTGTGCCCGAATGGTCGGCGTGGATCTCCTGCTCTTCTACGAGCCCGGGGAAGGAAGCGGCCGTTTCTTT GAAGAGGCGGCTCCGGGGTGGGCATGTCGTCCCCAGGAGGGGGGTGATCTGGGGGCGCGGCTCGATTCGGCCTTTCGGCT TGCTTTCGGTGAAGGGTATGGTGAAGTTGCCGTGATCGGTACCGACTCCCCCGACCTGCCTGAAGAGTATGTGCGGCTGG CGTTCGATCTGTTGGACCACCGGGCGGTGGACGCGGTCTATGGTCCCTCTGAAGATGGCGGTTACTACCTCCTGGCTCTG AAGCAACACCGGCCGGAGCTTTTCCGCGATATCCCCTGGTCCACCGGGGAGGTCCTGGAGCACTCGCTGGCTCGAGCCAA GGCGGTAGGCGTGCGGGTCGAGCTCCTCCCTGTCTGGTATGATGTGGATAGCATCGCCGATCTGTGGCGTCCGGGGCTGG CCGGGGCCGGCACCGTGGCACCACTTACGGCGGAATTCGTTTCCGGCCTTATTTCAGCACATCCACCAGATACCCCACCC CCTGCAGGTGAGAGATAA
Upstream 100 bases:
>100_bases ACTCACGCACGTTCCTTGTTAATACGCGCCGAAGCGGCTGACGACATCCCGTGTGGATAACTATGTGGAAAACCCCCAAA GTTGTGGATAACGCTAGCCG
Downstream 100 bases:
>100_bases CCTCCTGAATGTGCTCGAACCCCCGGGTCTCCAGCTCGATGAGGACCTCGGTCTTGCCGATGGGGAGCGATTTCGAGCGC CGGTCATGGGTGATGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCARMVGVDLLLFYEPGEGSGRFF EEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIGTDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLAL KQHRPELFRDIPWSTGEVLEHSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP PAGER
Sequences:
>Translated_245_residues MSAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCARMVGVDLLLFYEPGEGSGRFF EEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIGTDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLAL KQHRPELFRDIPWSTGEVLEHSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP PAGER >Mature_244_residues SAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCARMVGVDLLLFYEPGEGSGRFFE EAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIGTDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLALK QHRPELFRDIPWSTGEVLEHSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPPP AGER
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26599; Mature: 26468
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCAR CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH MVGVDLLLFYEPGEGSGRFFEEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIG HHCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE TDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLALKQHRPELFRDIPWSTGEVLE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHH HSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP HHHHHHHHHCEEEEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC PAGER CCCCC >Mature Secondary Structure SAVNPLPMSLQPCRKALMIFAKRPMAGRVKTRLTPPLSPGDAAELYRRMLLDILAKCAR CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH MVGVDLLLFYEPGEGSGRFFEEAAPGWACRPQEGGDLGARLDSAFRLAFGEGYGEVAVIG HHCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE TDSPDLPEEYVRLAFDLLDHRAVDAVYGPSEDGGYYLLALKQHRPELFRDIPWSTGEVLE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHH HSLARAKAVGVRVELLPVWYDVDSIADLWRPGLAGAGTVAPLTAEFVSGLISAHPPDTPP HHHHHHHHHCEEEEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC PAGER CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA