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The map label for this gene is 39995539

Identifier: 39995539

GI number: 39995539

Start: 459605

End: 461338

Strand: Direct

Name: 39995539

Synonym: GSU0431

Alternate gene names: NA

Gene position: 459605-461338 (Clockwise)

Preceding gene: 39995538

Following gene: 39995540

Centisome position: 12.05

GC content: 64.19

Gene sequence:

>1734_bases
ATGATCACCCGTCATTTTCAGGATGAACTCGCCCGACTCAAGGAGTTGGGGGCCGAGTTCTCCGTGACCCACCCGGCGTT
GGCGCCGATGCTCGGCGGTCCGTCGACCGACCCGGATGTGGAGCGGCTCCTGGAGGGCGTTGCCTTCCAGACGGCTCTCC
TTCGCCAAAAACTCGATGATGATTTCCCCGAAGTGGTCCACGATCTGGTTCGTCTTGTGGCCCCCCACTACCTGCGGCCG
GTGCCGGCCACCACCATCGTCGCCTTCGAACCGAAGCCGTCACTGACTCGCTCACGGCTGATTCCGGCCGGGACCGAGCT
TGCGTCGATCCCGGTGGAGGGAACCCGCTGCCTCTTCCGGACAACGAGCCCGGTAGAACTTCATCCTCTGGAACTTCTCG
AGGCAACGTTTGCCCAACCAGCAGGGAGCGCTCCAGTCGTAACCCTGTCCCTGTCGCTCACTGGCCTCTCGCTCGACCAC
TGGGAGCCACGATCGCTGCGATTTTTTCTGGCCGGCGACCATGCCCCGGCAGCGGAGCTGTTCCTGATCCTCTCCCGGCA
CCTGAAGCGAATCGTGATCACCCCGGAGGAGAGAGGGGCGTCGGCCAGCCTGCCCGCAGCCTGTCTTCAGCCGGTGGGCC
TCAATGACGACGAGCACCTGATTCCCTGGCCATCCCACGCCTTTCCCGGCTATCGGCTGTTGCAGGAATATTTTGCCGCG
CCCCAACGGTTCCTGTTCCTGGAGTTGACCGGCTGGGAACGCTGGACCACCCGTGGCAGCGGCTCGAGATTCACCATTAC
CTTCGAGTTAGGCGAACTCACTATCCCTCCGCCCCCGGTGCGGCGGGATAGCTTTGTTCTTTTCGCCTCCCCGGCCGTGA
ACCTCTTTTCACACGACGCCGAACCGATTCTCCTCGACCACCGGGTCGGGAGATACCCGGTGAGGCCTGCGGGTCTGGAA
CCGGGGCACGGTCAGGTATATTCCGTCGATCGTGTGACCGGTATCGTCCGGGGGGCGGCAACGGAGCGCATCTATCACCC
CTTCGAGCAGTTCAGGGATGGCGCAGATGCCCAGCCAACCTTTCATACCGCCGTATCCGCTTCGCCGGTCCGCGCCGGAT
TCGATGTGCACCTGGCCGTTGCCTACCCACAGGGGGAGGGGTTGCCGGAGACGGAGACGCTTTCCATCGCTCTTACCTGC
AGCAACGGCCGCCTGCCGGAAAATCTGTGGCTCGGCGACCTGTGCGAACCGACCTCCTCCTCACCCGAGAGTGCCACCTT
CCACAACATCACGCCACTTACCCCGACGCTGCTGCCGCCACTGGGGAAAAATCTCCTCTGGCGACTCGTTTCCCATCTGT
CCCTTAACCGCCTCTCCCTGGCCAGCGCCGACAATCTCCGCACTCTCCTGGCGCTCTACCTGTTCGAGGAGGGAGGGGAC
CGGGGTGACTTGGCCGCCAACCGGAAGCGGCTGGACGGGATCGAAGCGGTTATCGCCAAGCCGGCCGGCCGCCTCGTGGG
GGGGCACCTACTGCGGGGCAGCGAGATTGTCCTTACTCTGCGGGGGGACCACTTTGCCAGCCCGGGCGATCTGTTCCTCT
TCGGGGCGGTGCTCGACCGCTTTCTGGGGGGCTATGCCTCGCTCAACAGCTTCACCCGCCTGACCGTCCGCGAAAGCGTT
CGGGGAGAGGTGTACTCATGGGCTCCCCGCCTTGGTCACCGCCAGCTTCTCTAG

Upstream 100 bases:

>100_bases
GGCAGCGACGGCGGAGCGGTCTGTTTTGAAACGCTGGTGGATACCGACGGGAAGGTTACGGTGAGACGTTGACCATGCCC
GGGAAGAGAGAGCATACACG

Downstream 100 bases:

>100_bases
AGACGCAGCTGTTCGAGCGGGGGCATGAGTTCTCCTTTGCCCAGGCGGTGCGCCTGCTGCGGCTTCTTGCGGCCGCTCAG
GGGAGGGAGGGCGCTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MITRHFQDELARLKELGAEFSVTHPALAPMLGGPSTDPDVERLLEGVAFQTALLRQKLDDDFPEVVHDLVRLVAPHYLRP
VPATTIVAFEPKPSLTRSRLIPAGTELASIPVEGTRCLFRTTSPVELHPLELLEATFAQPAGSAPVVTLSLSLTGLSLDH
WEPRSLRFFLAGDHAPAAELFLILSRHLKRIVITPEERGASASLPAACLQPVGLNDDEHLIPWPSHAFPGYRLLQEYFAA
PQRFLFLELTGWERWTTRGSGSRFTITFELGELTIPPPPVRRDSFVLFASPAVNLFSHDAEPILLDHRVGRYPVRPAGLE
PGHGQVYSVDRVTGIVRGAATERIYHPFEQFRDGADAQPTFHTAVSASPVRAGFDVHLAVAYPQGEGLPETETLSIALTC
SNGRLPENLWLGDLCEPTSSSPESATFHNITPLTPTLLPPLGKNLLWRLVSHLSLNRLSLASADNLRTLLALYLFEEGGD
RGDLAANRKRLDGIEAVIAKPAGRLVGGHLLRGSEIVLTLRGDHFASPGDLFLFGAVLDRFLGGYASLNSFTRLTVRESV
RGEVYSWAPRLGHRQLL

Sequences:

>Translated_577_residues
MITRHFQDELARLKELGAEFSVTHPALAPMLGGPSTDPDVERLLEGVAFQTALLRQKLDDDFPEVVHDLVRLVAPHYLRP
VPATTIVAFEPKPSLTRSRLIPAGTELASIPVEGTRCLFRTTSPVELHPLELLEATFAQPAGSAPVVTLSLSLTGLSLDH
WEPRSLRFFLAGDHAPAAELFLILSRHLKRIVITPEERGASASLPAACLQPVGLNDDEHLIPWPSHAFPGYRLLQEYFAA
PQRFLFLELTGWERWTTRGSGSRFTITFELGELTIPPPPVRRDSFVLFASPAVNLFSHDAEPILLDHRVGRYPVRPAGLE
PGHGQVYSVDRVTGIVRGAATERIYHPFEQFRDGADAQPTFHTAVSASPVRAGFDVHLAVAYPQGEGLPETETLSIALTC
SNGRLPENLWLGDLCEPTSSSPESATFHNITPLTPTLLPPLGKNLLWRLVSHLSLNRLSLASADNLRTLLALYLFEEGGD
RGDLAANRKRLDGIEAVIAKPAGRLVGGHLLRGSEIVLTLRGDHFASPGDLFLFGAVLDRFLGGYASLNSFTRLTVRESV
RGEVYSWAPRLGHRQLL
>Mature_577_residues
MITRHFQDELARLKELGAEFSVTHPALAPMLGGPSTDPDVERLLEGVAFQTALLRQKLDDDFPEVVHDLVRLVAPHYLRP
VPATTIVAFEPKPSLTRSRLIPAGTELASIPVEGTRCLFRTTSPVELHPLELLEATFAQPAGSAPVVTLSLSLTGLSLDH
WEPRSLRFFLAGDHAPAAELFLILSRHLKRIVITPEERGASASLPAACLQPVGLNDDEHLIPWPSHAFPGYRLLQEYFAA
PQRFLFLELTGWERWTTRGSGSRFTITFELGELTIPPPPVRRDSFVLFASPAVNLFSHDAEPILLDHRVGRYPVRPAGLE
PGHGQVYSVDRVTGIVRGAATERIYHPFEQFRDGADAQPTFHTAVSASPVRAGFDVHLAVAYPQGEGLPETETLSIALTC
SNGRLPENLWLGDLCEPTSSSPESATFHNITPLTPTLLPPLGKNLLWRLVSHLSLNRLSLASADNLRTLLALYLFEEGGD
RGDLAANRKRLDGIEAVIAKPAGRLVGGHLLRGSEIVLTLRGDHFASPGDLFLFGAVLDRFLGGYASLNSFTRLTVRESV
RGEVYSWAPRLGHRQLL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63320; Mature: 63320

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRHFQDELARLKELGAEFSVTHPALAPMLGGPSTDPDVERLLEGVAFQTALLRQKLDD
CCCCHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
DFPEVVHDLVRLVAPHYLRPVPATTIVAFEPKPSLTRSRLIPAGTELASIPVEGTRCLFR
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEECCCCCCEEEEE
TTSPVELHPLELLEATFAQPAGSAPVVTLSLSLTGLSLDHWEPRSLRFFLAGDHAPAAEL
CCCCCEECHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCCHHHH
FLILSRHLKRIVITPEERGASASLPAACLQPVGLNDDEHLIPWPSHAFPGYRLLQEYFAA
HHHHHHHCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PQRFLFLELTGWERWTTRGSGSRFTITFELGELTIPPPPVRRDSFVLFASPAVNLFSHDA
CCEEEEEEEECCCEEECCCCCCEEEEEEEECEEECCCCCCCCCCEEEEECCCHHHHCCCC
EPILLDHRVGRYPVRPAGLEPGHGQVYSVDRVTGIVRGAATERIYHPFEQFRDGADAQPT
CCEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FHTAVSASPVRAGFDVHLAVAYPQGEGLPETETLSIALTCSNGRLPENLWLGDLCEPTSS
EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
SPESATFHNITPLTPTLLPPLGKNLLWRLVSHLSLNRLSLASADNLRTLLALYLFEEGGD
CCCCCEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCC
RGDLAANRKRLDGIEAVIAKPAGRLVGGHLLRGSEIVLTLRGDHFASPGDLFLFGAVLDR
CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHH
FLGGYASLNSFTRLTVRESVRGEVYSWAPRLGHRQLL
HHCCHHHHHHHEEEEEHHHHCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MITRHFQDELARLKELGAEFSVTHPALAPMLGGPSTDPDVERLLEGVAFQTALLRQKLDD
CCCCHHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
DFPEVVHDLVRLVAPHYLRPVPATTIVAFEPKPSLTRSRLIPAGTELASIPVEGTRCLFR
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEECCCCCCEEEEE
TTSPVELHPLELLEATFAQPAGSAPVVTLSLSLTGLSLDHWEPRSLRFFLAGDHAPAAEL
CCCCCEECHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCCHHHH
FLILSRHLKRIVITPEERGASASLPAACLQPVGLNDDEHLIPWPSHAFPGYRLLQEYFAA
HHHHHHHCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PQRFLFLELTGWERWTTRGSGSRFTITFELGELTIPPPPVRRDSFVLFASPAVNLFSHDA
CCEEEEEEEECCCEEECCCCCCEEEEEEEECEEECCCCCCCCCCEEEEECCCHHHHCCCC
EPILLDHRVGRYPVRPAGLEPGHGQVYSVDRVTGIVRGAATERIYHPFEQFRDGADAQPT
CCEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FHTAVSASPVRAGFDVHLAVAYPQGEGLPETETLSIALTCSNGRLPENLWLGDLCEPTSS
EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
SPESATFHNITPLTPTLLPPLGKNLLWRLVSHLSLNRLSLASADNLRTLLALYLFEEGGD
CCCCCEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCC
RGDLAANRKRLDGIEAVIAKPAGRLVGGHLLRGSEIVLTLRGDHFASPGDLFLFGAVLDR
CCCCHHHHHHHHHHHHHHHCCCCHHHCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHH
FLGGYASLNSFTRLTVRESVRGEVYSWAPRLGHRQLL
HHCCHHHHHHHEEEEEHHHHCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA