| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995538
Identifier: 39995538
GI number: 39995538
Start: 459169
End: 459576
Strand: Direct
Name: 39995538
Synonym: GSU0430
Alternate gene names: NA
Gene position: 459169-459576 (Clockwise)
Preceding gene: 39995537
Following gene: 39995539
Centisome position: 12.04
GC content: 64.22
Gene sequence:
>408_bases ATGCGCGAAGAACGCCTTCTGGAACGTATCCGCTCCCTGGAGCGGGATCCGTCGCGCCGCGGGGGGACTGATCGGGGCCG TCTGGTGGATTCAATCCTGGCACACGTCCGCCGGATTATTAACACGCGCCGGGGGAGCGTGCCTATCGCCCCTGACTTCG GCATCCCTGACATGCTCGACGTGCTTCAGAGCTACCCAGATTCGGTGCGGGAGATCGAACGGAGCATCCGTGCCGCCATC CAGGGCTTTGAGCCGCGTCTCGCCGACGTAAGGGTTGCCTTCGTCCCGCAGGAGGACGACGTGCTGGCGCTCCGGTTTGC CATCTCCGCCCGGCTTGGCAGCGACGGCGGAGCGGTCTGTTTTGAAACGCTGGTGGATACCGACGGGAAGGTTACGGTGA GACGTTGA
Upstream 100 bases:
>100_bases ATGGCCCCTGGTGGAGCGGGAACACGCCCTTGCCCTCCACTGGACCGGCGCCCCGGCCGATCTGGAGGTGGAGCTGATGG TGGTGGCCAAGGGGTAGCTC
Downstream 100 bases:
>100_bases CCATGCCCGGGAAGAGAGAGCATACACGATGATCACCCGTCATTTTCAGGATGAACTCGCCCGACTCAAGGAGTTGGGGG CCGAGTTCTCCGTGACCCAC
Product: tail lysozyme
Products: NA
Alternate protein names: GPW/Gp25 Family Protein; Tail Lysozyme
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MREERLLERIRSLERDPSRRGGTDRGRLVDSILAHVRRIINTRRGSVPIAPDFGIPDMLDVLQSYPDSVREIERSIRAAI QGFEPRLADVRVAFVPQEDDVLALRFAISARLGSDGGAVCFETLVDTDGKVTVRR
Sequences:
>Translated_135_residues MREERLLERIRSLERDPSRRGGTDRGRLVDSILAHVRRIINTRRGSVPIAPDFGIPDMLDVLQSYPDSVREIERSIRAAI QGFEPRLADVRVAFVPQEDDVLALRFAISARLGSDGGAVCFETLVDTDGKVTVRR >Mature_135_residues MREERLLERIRSLERDPSRRGGTDRGRLVDSILAHVRRIINTRRGSVPIAPDFGIPDMLDVLQSYPDSVREIERSIRAAI QGFEPRLADVRVAFVPQEDDVLALRFAISARLGSDGGAVCFETLVDTDGKVTVRR
Specific function: Unknown
COG id: COG3518
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15170; Mature: 15170
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREERLLERIRSLERDPSRRGGTDRGRLVDSILAHVRRIINTRRGSVPIAPDFGIPDMLD CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH VLQSYPDSVREIERSIRAAIQGFEPRLADVRVAFVPQEDDVLALRFAISARLGSDGGAVC HHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHH FETLVDTDGKVTVRR HHHHHCCCCCEEECC >Mature Secondary Structure MREERLLERIRSLERDPSRRGGTDRGRLVDSILAHVRRIINTRRGSVPIAPDFGIPDMLD CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH VLQSYPDSVREIERSIRAAIQGFEPRLADVRVAFVPQEDDVLALRFAISARLGSDGGAVC HHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHH FETLVDTDGKVTVRR HHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA