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The map label for this gene is ytqA [H]

Identifier: 39995475

GI number: 39995475

Start: 398821

End: 399738

Strand: Direct

Name: ytqA [H]

Synonym: GSU0367

Alternate gene names: 39995475

Gene position: 398821-399738 (Clockwise)

Preceding gene: 39995474

Following gene: 39995482

Centisome position: 10.46

GC content: 66.45

Gene sequence:

>918_bases
GTGACGGAGCGGCGCTACAACGCTTTTTCCGATGAGCTTCGCCGCGTCTTCGGCTGCCGGGTACAGCGGGTGTCGGTGGA
TGCGGGCTTCACCTGCCCCAACCGGGACGGCACCACGGGGCTCGGCGGCTGCATTTTCTGCGGCGGCCGGGGCTCGGGCT
CCTTCGGCATCAGGCCGGAACTGGGAGTGGCCGATCAGCTCGCCCACGGCATGACGTACCTCTCGCGGCGCTACGGGGCG
GAGAAATTCCTCGCCTATTTCCAGTCCTACTCCAACACCTACGCCCCGGTAGAGCGGCTCCGACTCCTCTACGACGAGGC
CCTGTCAGTCCCCGGCGTGGCCGGGCTCATCGTCGGCACCCGTCCCGACTGTCTCCCGCCTGAGGTCATCGATCTTCTGG
CCGAGTATGCCCGCTCGACCTACTTCTGGCTCGAACTGGGAATGCAGACATCCCACGACCGGACGCTGGCCCTCCTCAAC
CGTGGCCACGACGCGGCATCGTTCCAGGATGCCGCGGACCGTTGCCGCCGCCGGGGAATCAGGCTCTGCGCGCACGTGAT
TCTCGGGTTGCCGGGAGAGACCGACGCGGACATGCTCGAAACGGCGATGATGCTCAACGGGGTCGGTATCGACGGGGTGA
AGCTCCACCATCTCCACGTGATGAAGGATACGCCGCTGGAAGTCATGTACCGTCAGGGGGCGGTCGGCTGTCTGGGGCGG
GATGACTACGTGGGACTCGTCTGCGATTTTCTGGAGCGGCTCGATCCCCGCATTGTCGTCCATCGCCTGGTGGGGGATGC
CCCGGCCGACCACCTGGTGGCCCCTGCCTGGACCCTGGAGAAGTCGGCGGTTCTTGCCGCAATCGACGAGGAATTCATCC
GTCGCGACTCCCGCCAGGGGGCCCGCCTGTCCCGGTAA

Upstream 100 bases:

>100_bases
AGATGAAGGGGCTCGGGCTCGACTGGAAAACCATCGAGACGATCTGGGCCAGCACGGGATATACCTGGAACGACAAGCTG
AAAACGTTCGAGGTGGTCCG

Downstream 100 bases:

>100_bases
GCCCCCCCATTTCCACTCACAGGCCGAAGCCTGCCTCAGAACGGATACCCCAGACCCACGAAGACCGCCGGTCCCTCGTT
GCCGAATCCGATGTCGACCC

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTERRYNAFSDELRRVFGCRVQRVSVDAGFTCPNRDGTTGLGGCIFCGGRGSGSFGIRPELGVADQLAHGMTYLSRRYGA
EKFLAYFQSYSNTYAPVERLRLLYDEALSVPGVAGLIVGTRPDCLPPEVIDLLAEYARSTYFWLELGMQTSHDRTLALLN
RGHDAASFQDAADRCRRRGIRLCAHVILGLPGETDADMLETAMMLNGVGIDGVKLHHLHVMKDTPLEVMYRQGAVGCLGR
DDYVGLVCDFLERLDPRIVVHRLVGDAPADHLVAPAWTLEKSAVLAAIDEEFIRRDSRQGARLSR

Sequences:

>Translated_305_residues
MTERRYNAFSDELRRVFGCRVQRVSVDAGFTCPNRDGTTGLGGCIFCGGRGSGSFGIRPELGVADQLAHGMTYLSRRYGA
EKFLAYFQSYSNTYAPVERLRLLYDEALSVPGVAGLIVGTRPDCLPPEVIDLLAEYARSTYFWLELGMQTSHDRTLALLN
RGHDAASFQDAADRCRRRGIRLCAHVILGLPGETDADMLETAMMLNGVGIDGVKLHHLHVMKDTPLEVMYRQGAVGCLGR
DDYVGLVCDFLERLDPRIVVHRLVGDAPADHLVAPAWTLEKSAVLAAIDEEFIRRDSRQGARLSR
>Mature_304_residues
TERRYNAFSDELRRVFGCRVQRVSVDAGFTCPNRDGTTGLGGCIFCGGRGSGSFGIRPELGVADQLAHGMTYLSRRYGAE
KFLAYFQSYSNTYAPVERLRLLYDEALSVPGVAGLIVGTRPDCLPPEVIDLLAEYARSTYFWLELGMQTSHDRTLALLNR
GHDAASFQDAADRCRRRGIRLCAHVILGLPGETDADMLETAMMLNGVGIDGVKLHHLHVMKDTPLEVMYRQGAVGCLGRD
DYVGLVCDFLERLDPRIVVHRLVGDAPADHLVAPAWTLEKSAVLAAIDEEFIRRDSRQGARLSR

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=306, Percent_Identity=38.562091503268, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 33752; Mature: 33621

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERRYNAFSDELRRVFGCRVQRVSVDAGFTCPNRDGTTGLGGCIFCGGRGSGSFGIRPE
CCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
LGVADQLAHGMTYLSRRYGAEKFLAYFQSYSNTYAPVERLRLLYDEALSVPGVAGLIVGT
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
RPDCLPPEVIDLLAEYARSTYFWLELGMQTSHDRTLALLNRGHDAASFQDAADRCRRRGI
CCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
RLCAHVILGLPGETDADMLETAMMLNGVGIDGVKLHHLHVMKDTPLEVMYRQGAVGCLGR
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCC
DDYVGLVCDFLERLDPRIVVHRLVGDAPADHLVAPAWTLEKSAVLAAIDEEFIRRDSRQG
CCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ARLSR
CCCCC
>Mature Secondary Structure 
TERRYNAFSDELRRVFGCRVQRVSVDAGFTCPNRDGTTGLGGCIFCGGRGSGSFGIRPE
CCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
LGVADQLAHGMTYLSRRYGAEKFLAYFQSYSNTYAPVERLRLLYDEALSVPGVAGLIVGT
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
RPDCLPPEVIDLLAEYARSTYFWLELGMQTSHDRTLALLNRGHDAASFQDAADRCRRRGI
CCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
RLCAHVILGLPGETDADMLETAMMLNGVGIDGVKLHHLHVMKDTPLEVMYRQGAVGCLGR
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCC
DDYVGLVCDFLERLDPRIVVHRLVGDAPADHLVAPAWTLEKSAVLAAIDEEFIRRDSRQG
CCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ARLSR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]