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The map label for this gene is 39995474

Identifier: 39995474

GI number: 39995474

Start: 397904

End: 398824

Strand: Direct

Name: 39995474

Synonym: GSU0366

Alternate gene names: NA

Gene position: 397904-398824 (Clockwise)

Preceding gene: 39995470

Following gene: 39995475

Centisome position: 10.43

GC content: 66.45

Gene sequence:

>921_bases
ATGGATAACCTTGCCGAACACAGCGACAGGACGCCGACCCCCATCGTGGCCATCGATGGGACAACTATCCGCCGGATCCG
GGAGGCCAAACGACTCACCCAGCTCTACGTGGCCAGCGTAGTGGGGGTGACGACCGACACCATCTCCCGGTGGGAGAACA
ACCGCTACCCGTCGGTAAAGCGGGACAATGCCGAAAAACTGGCCCAGGCCCTGGAGGTATCCCTGGAGGACATCCTCCGG
CGGGAAGAGGCGGCGGAGGACGCCCCGGCCGAGGTCGCGCCCCCCGAGCCGCCGCCGCGCCGCCGGCTCCGGCTTGCCGT
CATCCTGCTCCTGGCGGGAGCGGCGATTCTGGGGATCATGTTTTTCCGGGGGGCTGCGCCGGGGCTGAAGGCAGAGCGGA
CCCTGCCCCCCTACAGTGCGCCGGGCCAGATCCTGCCGGTTAGGGTGAAGGTGGAACGGCCGGCAGAAGGCGGGAGCGGA
TTTATTCTCAAGGAGCGCATTCCGGCCGGCTGGCGGTTCGTGAGCGCCAATCCGCCGGTGACCGGCGAGGCGGGGGTGCG
GGAGATCAAGTGGCTCATTCCCCCCGGTGCGGGAACCATGACGATTTCCTATACCCTGATGTCGCCCCGCGAGACCCCCC
TCAGGACGGCGGCCGATTTCGGCGGCGAAGTGGTTCGCTCCGACGAAAGAGGCACCCGGCGCGAACCGGTGGCGGGTGCG
GCACGGGTGACCGTGGCCGGCATCCACTGGGCCGACGTGAACGGTGACGGCCGCATTGATGACAACGAGATCATGCCCGC
CTACTATCTCACCGAGGAGATGAAGGGGCTCGGGCTCGACTGGAAAACCATCGAGACGATCTGGGCCAGCACGGGATATA
CCTGGAACGACAAGCTGAAAACGTTCGAGGTGGTCCGGTGA

Upstream 100 bases:

>100_bases
ACGTGTGAGCCGGGGCGGGATCGCCGCCAGTGTTCCGTGGACGGGGACCTTCTCTCCATGGGGTTCTTTGCCGGCACAAA
ACCTGTTACAATAACAGCCT

Downstream 100 bases:

>100_bases
CGGAGCGGCGCTACAACGCTTTTTCCGATGAGCTTCGCCGCGTCTTCGGCTGCCGGGTACAGCGGGTGTCGGTGGATGCG
GGCTTCACCTGCCCCAACCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDNLAEHSDRTPTPIVAIDGTTIRRIREAKRLTQLYVASVVGVTTDTISRWENNRYPSVKRDNAEKLAQALEVSLEDILR
REEAAEDAPAEVAPPEPPPRRRLRLAVILLLAGAAILGIMFFRGAAPGLKAERTLPPYSAPGQILPVRVKVERPAEGGSG
FILKERIPAGWRFVSANPPVTGEAGVREIKWLIPPGAGTMTISYTLMSPRETPLRTAADFGGEVVRSDERGTRREPVAGA
ARVTVAGIHWADVNGDGRIDDNEIMPAYYLTEEMKGLGLDWKTIETIWASTGYTWNDKLKTFEVVR

Sequences:

>Translated_306_residues
MDNLAEHSDRTPTPIVAIDGTTIRRIREAKRLTQLYVASVVGVTTDTISRWENNRYPSVKRDNAEKLAQALEVSLEDILR
REEAAEDAPAEVAPPEPPPRRRLRLAVILLLAGAAILGIMFFRGAAPGLKAERTLPPYSAPGQILPVRVKVERPAEGGSG
FILKERIPAGWRFVSANPPVTGEAGVREIKWLIPPGAGTMTISYTLMSPRETPLRTAADFGGEVVRSDERGTRREPVAGA
ARVTVAGIHWADVNGDGRIDDNEIMPAYYLTEEMKGLGLDWKTIETIWASTGYTWNDKLKTFEVVR
>Mature_306_residues
MDNLAEHSDRTPTPIVAIDGTTIRRIREAKRLTQLYVASVVGVTTDTISRWENNRYPSVKRDNAEKLAQALEVSLEDILR
REEAAEDAPAEVAPPEPPPRRRLRLAVILLLAGAAILGIMFFRGAAPGLKAERTLPPYSAPGQILPVRVKVERPAEGGSG
FILKERIPAGWRFVSANPPVTGEAGVREIKWLIPPGAGTMTISYTLMSPRETPLRTAADFGGEVVRSDERGTRREPVAGA
ARVTVAGIHWADVNGDGRIDDNEIMPAYYLTEEMKGLGLDWKTIETIWASTGYTWNDKLKTFEVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33688; Mature: 33688

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00018 EF_HAND_1 ; PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLAEHSDRTPTPIVAIDGTTIRRIREAKRLTQLYVASVVGVTTDTISRWENNRYPSVK
CCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RDNAEKLAQALEVSLEDILRREEAAEDAPAEVAPPEPPPRRRLRLAVILLLAGAAILGIM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FFRGAAPGLKAERTLPPYSAPGQILPVRVKVERPAEGGSGFILKERIPAGWRFVSANPPV
HHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCC
TGEAGVREIKWLIPPGAGTMTISYTLMSPRETPLRTAADFGGEVVRSDERGTRREPVAGA
CCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCC
ARVTVAGIHWADVNGDGRIDDNEIMPAYYLTEEMKGLGLDWKTIETIWASTGYTWNDKLK
EEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCC
TFEVVR
EEEECC
>Mature Secondary Structure
MDNLAEHSDRTPTPIVAIDGTTIRRIREAKRLTQLYVASVVGVTTDTISRWENNRYPSVK
CCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RDNAEKLAQALEVSLEDILRREEAAEDAPAEVAPPEPPPRRRLRLAVILLLAGAAILGIM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FFRGAAPGLKAERTLPPYSAPGQILPVRVKVERPAEGGSGFILKERIPAGWRFVSANPPV
HHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCC
TGEAGVREIKWLIPPGAGTMTISYTLMSPRETPLRTAADFGGEVVRSDERGTRREPVAGA
CCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCC
ARVTVAGIHWADVNGDGRIDDNEIMPAYYLTEEMKGLGLDWKTIETIWASTGYTWNDKLK
EEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCC
TFEVVR
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA