| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is recX [H]
Identifier: 39995258
GI number: 39995258
Start: 163258
End: 163737
Strand: Direct
Name: recX [H]
Synonym: GSU0147
Alternate gene names: 39995258
Gene position: 163258-163737 (Clockwise)
Preceding gene: 39995257
Following gene: 39995259
Centisome position: 4.28
GC content: 68.54
Gene sequence:
>480_bases ATGCATTCCCGACCGGAGCGGCGGCGTGACCCGTTGTCCACCGCCCTCGACATCCTTTCGCGTCGGGACCACAGCGAAGC CGAACTTGCCCGCAAGCTGAGGTCCAGGGGGATCGACGCGGGGGAGATCGACCGCATCGTCGCGCGCCTCAGGGAGTTCG GCTACCTGAATGACCGCCGTGTTGCCTGCCGCCTGGCGGAATCGGCCCTGGCCCAGGGGAAAATGGTGGGGGCTCGACTC CGGGTCGAGCTGCGCCGCCGCGGGATTCCACCGGAACTGGCCGAAGAGGCCCTGGCCCAGGCGGCGGCCGGTTGCGACGA ACGGGCCTTGGTCGGAGACCTGCTGGCCCGGAAATTTCCCGGCTTCGATCCGGCTGTGGCGGACCCTCGCGAAAAGCGGC GGGTGGTGGGCTGGTTCCAGCGCCGCGGGTTCGGGCTCAGTGCCATTCTTGAAGCGCTCCGGTGTCCTGTCGATGAATGA
Upstream 100 bases:
>100_bases GACGACTTCGTCCATGACGAGGCTCCCCCTGCGGAGGGAGAGGGCTCCGTCGAGGGCATCGAGAAGTTCTAGGCCGGTGG CCCGTGAGGTTGATTTAAGC
Downstream 100 bases:
>100_bases CGGAACGGCACCGTACGAAGAGATTGACCACACGTATTAATTACAATGATCATGCAGATACAGAGGACCCGATGACCGGA AAAGAGATACGCGCCCGATT
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MHSRPERRRDPLSTALDILSRRDHSEAELARKLRSRGIDAGEIDRIVARLREFGYLNDRRVACRLAESALAQGKMVGARL RVELRRRGIPPELAEEALAQAAAGCDERALVGDLLARKFPGFDPAVADPREKRRVVGWFQRRGFGLSAILEALRCPVDE
Sequences:
>Translated_159_residues MHSRPERRRDPLSTALDILSRRDHSEAELARKLRSRGIDAGEIDRIVARLREFGYLNDRRVACRLAESALAQGKMVGARL RVELRRRGIPPELAEEALAQAAAGCDERALVGDLLARKFPGFDPAVADPREKRRVVGWFQRRGFGLSAILEALRCPVDE >Mature_159_residues MHSRPERRRDPLSTALDILSRRDHSEAELARKLRSRGIDAGEIDRIVARLREFGYLNDRRVACRLAESALAQGKMVGARL RVELRRRGIPPELAEEALAQAAAGCDERALVGDLLARKFPGFDPAVADPREKRRVVGWFQRRGFGLSAILEALRCPVDE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 17865; Mature: 17865
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSRPERRRDPLSTALDILSRRDHSEAELARKLRSRGIDAGEIDRIVARLREFGYLNDRR CCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH VACRLAESALAQGKMVGARLRVELRRRGIPPELAEEALAQAAAGCDERALVGDLLARKFP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC GFDPAVADPREKRRVVGWFQRRGFGLSAILEALRCPVDE CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MHSRPERRRDPLSTALDILSRRDHSEAELARKLRSRGIDAGEIDRIVARLREFGYLNDRR CCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH VACRLAESALAQGKMVGARLRVELRRRGIPPELAEEALAQAAAGCDERALVGDLLARKFP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC GFDPAVADPREKRRVVGWFQRRGFGLSAILEALRCPVDE CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA