| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yqjF [C]
Identifier: 39995247
GI number: 39995247
Start: 151068
End: 151505
Strand: Direct
Name: yqjF [C]
Synonym: GSU0136
Alternate gene names: 39995247
Gene position: 151068-151505 (Clockwise)
Preceding gene: 39995244
Following gene: 39995249
Centisome position: 3.96
GC content: 62.1
Gene sequence:
>438_bases ATGGCCAAGTCGAACATGGGCGCCGTGGCAGATTCACTGGCGCTTCTCATGATCAGGGTGCCGCTCGGCGCCATATTCAT TGCCCACGGCTCCCAGAAGCTTCTCGGTGCCTTCGGGGGGCAGGGGCTCACCGCCACCTTCAGAGTATTCGAGGAAAAGC TGGGAATCCCGCCGATTTTCACGCTGCTGGCCATCATTGCCGAATTCGGGGGTGGTGTTGGCGTCCTCTGCGGTTTCCTC ACCCGGCTGTCCGGCTTCGGCATCGCCTCGACCATGGCGGTCGCCATGTACAAGGTTCACTGGGCGAACGGCTTCTTCCT CAACGGCCCCCGGGGGAACGGCATCGAGTACAACCTCGCCCTGCTCGGTATGGCGCTGGCTCTCGTCTTTGCCGGGGGCG GGGCGTGGTCTGTTGATCGCTATCTCTTCAAACGGTAA
Upstream 100 bases:
>100_bases AGGGGTATTTACCGTTGCGCGCGGACGGCTCTTGTGGCAAGAATAGCAGTGGCCGGTCATGCGTGATGCGCACGCCGGCA CGCCAATGCAGGAGGTTCCC
Downstream 100 bases:
>100_bases CTTTTTGCCCTTGATTTCATAGTCGTCCCATCGGGGTCGAATGAGTGCCGGATTGGCCGCGACGACTGGGCATGGCCACA GACGTAACTGCGTCATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: DoxD-Like Family Protein; Membrane DoxD-Like Family Protein; DoxX Subfamily; Doxx Family Protein; DoxX-Like
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAKSNMGAVADSLALLMIRVPLGAIFIAHGSQKLLGAFGGQGLTATFRVFEEKLGIPPIFTLLAIIAEFGGGVGVLCGFL TRLSGFGIASTMAVAMYKVHWANGFFLNGPRGNGIEYNLALLGMALALVFAGGGAWSVDRYLFKR
Sequences:
>Translated_145_residues MAKSNMGAVADSLALLMIRVPLGAIFIAHGSQKLLGAFGGQGLTATFRVFEEKLGIPPIFTLLAIIAEFGGGVGVLCGFL TRLSGFGIASTMAVAMYKVHWANGFFLNGPRGNGIEYNLALLGMALALVFAGGGAWSVDRYLFKR >Mature_144_residues AKSNMGAVADSLALLMIRVPLGAIFIAHGSQKLLGAFGGQGLTATFRVFEEKLGIPPIFTLLAIIAEFGGGVGVLCGFLT RLSGFGIASTMAVAMYKVHWANGFFLNGPRGNGIEYNLALLGMALALVFAGGGAWSVDRYLFKR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15215; Mature: 15084
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSNMGAVADSLALLMIRVPLGAIFIAHGSQKLLGAFGGQGLTATFRVFEEKLGIPPIF CCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH TLLAIIAEFGGGVGVLCGFLTRLSGFGIASTMAVAMYKVHWANGFFLNGPRGNGIEYNLA HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHH LLGMALALVFAGGGAWSVDRYLFKR HHHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure AKSNMGAVADSLALLMIRVPLGAIFIAHGSQKLLGAFGGQGLTATFRVFEEKLGIPPIF CCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH TLLAIIAEFGGGVGVLCGFLTRLSGFGIASTMAVAMYKVHWANGFFLNGPRGNGIEYNLA HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHH LLGMALALVFAGGGAWSVDRYLFKR HHHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA