| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995244
Identifier: 39995244
GI number: 39995244
Start: 147502
End: 148668
Strand: Direct
Name: 39995244
Synonym: GSU0133
Alternate gene names: NA
Gene position: 147502-148668 (Clockwise)
Preceding gene: 39995242
Following gene: 39995247
Centisome position: 3.87
GC content: 62.3
Gene sequence:
>1167_bases ATGGGTATTCTTTCAACAACAACAGCCATATGCCAGTTCCGGGTCGCGGGGGATCTCCCTGCCGGTGACCTCTATCCCTG GATTGCCGAACATCTCGCCCGACAGGCCTTTCAGTCCATCGATCAAGGGGTCGCCGAGCAGTCCGTGGGGTGGGTTCATC TGGATGACCATCGGCAGATGAGCTTCGACATCCCCGCCGCCTTCTGGCGTGACCATTACGTGGCCTTCACCCTGCGCCGC GACCAGCGCAAGCTTCCGGCGGCGCTGGTAAAGGCCTATCTTCAGGTGGCCGAGCATGAGTACCTCTCGGCCCATCCCGG CCTCAACCGGGTGCCCAAGCAGAAGCGCGAGGAGCTGAAAGAGGCGGTGCGCCTCAACCTCCTGGCCAAGACCTTGCCGG TTCCCTCCACCTGGGATGCGGTCTGGGACACCCGCACCGGTATCGTCACCTTTACCTCCCTGTCGGCTCCCATTATCGAG CTGTTCGAGACCCAGTTCAAGAAGACCTTCGAGGGGACGCGCCTGGTGGCGATCCATCCCTATGCCCGGGCAGAGGCCGT GGGAGGCGAAGGGCTGAAGCCTGCCCTCGAACAGGCCAACCTCGCCACGAGCGATGCCGCCATCGATCTGATCAGGAGCA ACCAGTGGCTCGGGTGGGATTTCCTCCTCTGGCTTCTCCACCGGACCATGACCGATTCTTCCGAGTACTGCGTGGGGCAG CCCGGCCCGGCTCTGGCAGGCGAGCCCTTCGTGGCTTACCTGAACGATCGCCTGGTCCTCGTGAGCGCCGGGGAGGCAGG AACCCAGAAAATCACCGTGGCCGGTCCCCAGGACCACTTCCGAGAAGCCCGCACTGCCCTTGCCCACGGCAAGCGGATCA CCGAATCGACTCTCTACCTGGAAAAGGAGGAGCATGTCTGGAAGTTGACCCTCAAGGGGGAACTCTTCCATTTTGCTTCC CTCAAGTCCCCCAAGGTGGCCATCGAAAAGGGCGAGCACGTGGACGAAGGGAGCGAACGGGAAGCGGCCTTTTACGAGCG GATGTATGTTCTGGAACAGGGACTCCAGCTCTTCGACAGCCTGTACGGCGAATTCCTCACGGTGCGTCTGGGTGCCGGAT GGGGCGAAGAACTGGCTCGGATCGAAGGGTGGCTGGCAGGGGAGTAA
Upstream 100 bases:
>100_bases ATCCATTGCATCGCGCCCGTCGATCGATAATCTGCTTGCGCCCCGGCGCCCCGCCGGTGTATCACTGATCCCTTTCCACC TCATCCGAAGGAGCAGAACC
Downstream 100 bases:
>100_bases GCCCCCCTCTATTCCGCGATTTTCCAGAGGCCCGGAAACTCCCCCGGCAGAAGCGGCCGGGGGGTAAGATGCTCGGGCAG GCGGATCAGCCGGGTTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MGILSTTTAICQFRVAGDLPAGDLYPWIAEHLARQAFQSIDQGVAEQSVGWVHLDDHRQMSFDIPAAFWRDHYVAFTLRR DQRKLPAALVKAYLQVAEHEYLSAHPGLNRVPKQKREELKEAVRLNLLAKTLPVPSTWDAVWDTRTGIVTFTSLSAPIIE LFETQFKKTFEGTRLVAIHPYARAEAVGGEGLKPALEQANLATSDAAIDLIRSNQWLGWDFLLWLLHRTMTDSSEYCVGQ PGPALAGEPFVAYLNDRLVLVSAGEAGTQKITVAGPQDHFREARTALAHGKRITESTLYLEKEEHVWKLTLKGELFHFAS LKSPKVAIEKGEHVDEGSEREAAFYERMYVLEQGLQLFDSLYGEFLTVRLGAGWGEELARIEGWLAGE
Sequences:
>Translated_388_residues MGILSTTTAICQFRVAGDLPAGDLYPWIAEHLARQAFQSIDQGVAEQSVGWVHLDDHRQMSFDIPAAFWRDHYVAFTLRR DQRKLPAALVKAYLQVAEHEYLSAHPGLNRVPKQKREELKEAVRLNLLAKTLPVPSTWDAVWDTRTGIVTFTSLSAPIIE LFETQFKKTFEGTRLVAIHPYARAEAVGGEGLKPALEQANLATSDAAIDLIRSNQWLGWDFLLWLLHRTMTDSSEYCVGQ PGPALAGEPFVAYLNDRLVLVSAGEAGTQKITVAGPQDHFREARTALAHGKRITESTLYLEKEEHVWKLTLKGELFHFAS LKSPKVAIEKGEHVDEGSEREAAFYERMYVLEQGLQLFDSLYGEFLTVRLGAGWGEELARIEGWLAGE >Mature_387_residues GILSTTTAICQFRVAGDLPAGDLYPWIAEHLARQAFQSIDQGVAEQSVGWVHLDDHRQMSFDIPAAFWRDHYVAFTLRRD QRKLPAALVKAYLQVAEHEYLSAHPGLNRVPKQKREELKEAVRLNLLAKTLPVPSTWDAVWDTRTGIVTFTSLSAPIIEL FETQFKKTFEGTRLVAIHPYARAEAVGGEGLKPALEQANLATSDAAIDLIRSNQWLGWDFLLWLLHRTMTDSSEYCVGQP GPALAGEPFVAYLNDRLVLVSAGEAGTQKITVAGPQDHFREARTALAHGKRITESTLYLEKEEHVWKLTLKGELFHFASL KSPKVAIEKGEHVDEGSEREAAFYERMYVLEQGLQLFDSLYGEFLTVRLGAGWGEELARIEGWLAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43483; Mature: 43352
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILSTTTAICQFRVAGDLPAGDLYPWIAEHLARQAFQSIDQGVAEQSVGWVHLDDHRQM CCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCE SFDIPAAFWRDHYVAFTLRRDQRKLPAALVKAYLQVAEHEYLSAHPGLNRVPKQKREELK EECCCHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EAVRLNLLAKTLPVPSTWDAVWDTRTGIVTFTSLSAPIIELFETQFKKTFEGTRLVAIHP HHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECC YARAEAVGGEGLKPALEQANLATSDAAIDLIRSNQWLGWDFLLWLLHRTMTDSSEYCVGQ CHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCC PGPALAGEPFVAYLNDRLVLVSAGEAGTQKITVAGPQDHFREARTALAHGKRITESTLYL CCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHEEE EKEEHVWKLTLKGELFHFASLKSPKVAIEKGEHVDEGSEREAAFYERMYVLEQGLQLFDS ECCCCEEEEEECCCEEEHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LYGEFLTVRLGAGWGEELARIEGWLAGE HHHHEEEEEECCCCHHHHHHHCCCCCCC >Mature Secondary Structure GILSTTTAICQFRVAGDLPAGDLYPWIAEHLARQAFQSIDQGVAEQSVGWVHLDDHRQM CCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCE SFDIPAAFWRDHYVAFTLRRDQRKLPAALVKAYLQVAEHEYLSAHPGLNRVPKQKREELK EECCCHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EAVRLNLLAKTLPVPSTWDAVWDTRTGIVTFTSLSAPIIELFETQFKKTFEGTRLVAIHP HHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECC YARAEAVGGEGLKPALEQANLATSDAAIDLIRSNQWLGWDFLLWLLHRTMTDSSEYCVGQ CHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCC PGPALAGEPFVAYLNDRLVLVSAGEAGTQKITVAGPQDHFREARTALAHGKRITESTLYL CCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHEEE EKEEHVWKLTLKGELFHFASLKSPKVAIEKGEHVDEGSEREAAFYERMYVLEQGLQLFDS ECCCCEEEEEECCCEEEHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LYGEFLTVRLGAGWGEELARIEGWLAGE HHHHEEEEEECCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA