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The map label for this gene is soj [H]

Identifier: 39995217

GI number: 39995217

Start: 121771

End: 122544

Strand: Direct

Name: soj [H]

Synonym: GSU0106

Alternate gene names: 39995217

Gene position: 121771-122544 (Clockwise)

Preceding gene: 39995215

Following gene: 308513277

Centisome position: 3.19

GC content: 59.69

Gene sequence:

>774_bases
ATGGCCAAAATAATCTGTATCGCCAATCAAAAAGGGGGGGTCGGCAAGACCACCACGGCCGTTAATCTGGCAGCATCCCT
TGCTGCAGCCGAGAAGCAAACGCTGCTGGTCGACATGGATCCCCAGGGGAATGCCGGCAGCGGTGTCGGTGTTGACAAGG
CTGGGCTGGAGGAATCGGTCTACGACGCCATCATCAATGATGTGGACCCGTCGGGACTCATCGTCGGAACCGACCTTGCC
CACCTGGATCTGCTCCCCTCGACCACCGACCTGGCCGGTGCTGAACTCGAGCTGGTCTCCATGCCCGAGAGGGAGCGCAG
GCTCAAGGCGGCGCTCGCCCGTCTCTCGCAGCGTTATGACTATATCATCATTGATTGCCCCCCATCCCTGGGGCTGCTCA
CCGTGAATGCCATGACCGCCGCCGATTCGGTCCTGATCCCTCTCCAGTGCGAATACTACGCCATGGAGGGGCTCTCGCAG
ATTATCAAGACCATAAAGCTCGTGCAGAAGGGGCTCAACCCCGGCCTTGCCATCGAAGGGATCGTTCTGACCATGTACGA
TGGCCGAAACAACCTGTCCCGTCAGGTGAGCGAGGAAATACGAGGTCATTTTGCGGACATTGCCTTCCAGACGGTCATTC
CTCGCAATGTCCGCCTCTCCGAGGCGCCCAGCCATGGTCGCCCCGTCATCCTCTATGACATCACGTCCCGGGGGGCGGTG
AGCTACATGGAACTGGCCCGGGAACTCATGACAAGGGAGGTCCGTCGTGGTTAA

Upstream 100 bases:

>100_bases
AACAGCTTGAAAGAACGCAGGAAAAATACCTTCACAAACGGTGTCGAGTATGGTAACTATCACGAGTTTCCAGGACTGCC
AACGACGAAGCGATTGAGCC

Downstream 100 bases:

>100_bases
AAAAACCGGCCTCGGCAAGGGGATGGCGGCCCTTCTTCCCGTCGTGGAAGAGGAAGGGAAGCGCTACTTCTCGTGCCCCA
TCGAAGATATCCGCCCCCAT

Product: soj protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MAKIICIANQKGGVGKTTTAVNLAASLAAAEKQTLLVDMDPQGNAGSGVGVDKAGLEESVYDAIINDVDPSGLIVGTDLA
HLDLLPSTTDLAGAELELVSMPERERRLKAALARLSQRYDYIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQ
IIKTIKLVQKGLNPGLAIEGIVLTMYDGRNNLSRQVSEEIRGHFADIAFQTVIPRNVRLSEAPSHGRPVILYDITSRGAV
SYMELARELMTREVRRG

Sequences:

>Translated_257_residues
MAKIICIANQKGGVGKTTTAVNLAASLAAAEKQTLLVDMDPQGNAGSGVGVDKAGLEESVYDAIINDVDPSGLIVGTDLA
HLDLLPSTTDLAGAELELVSMPERERRLKAALARLSQRYDYIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQ
IIKTIKLVQKGLNPGLAIEGIVLTMYDGRNNLSRQVSEEIRGHFADIAFQTVIPRNVRLSEAPSHGRPVILYDITSRGAV
SYMELARELMTREVRRG
>Mature_256_residues
AKIICIANQKGGVGKTTTAVNLAASLAAAEKQTLLVDMDPQGNAGSGVGVDKAGLEESVYDAIINDVDPSGLIVGTDLAH
LDLLPSTTDLAGAELELVSMPERERRLKAALARLSQRYDYIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQI
IKTIKLVQKGLNPGLAIEGIVLTMYDGRNNLSRQVSEEIRGHFADIAFQTVIPRNVRLSEAPSHGRPVILYDITSRGAVS
YMELARELMTREVRRG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27662; Mature: 27531

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIICIANQKGGVGKTTTAVNLAASLAAAEKQTLLVDMDPQGNAGSGVGVDKAGLEESV
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHCCHHHH
YDAIINDVDPSGLIVGTDLAHLDLLPSTTDLAGAELELVSMPERERRLKAALARLSQRYD
HHHHHHCCCCCCEEEECCHHEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
YIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQIIKTIKLVQKGLNPGLAIEG
EEEEECCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
IVLTMYDGRNNLSRQVSEEIRGHFADIAFQTVIPRNVRLSEAPSHGRPVILYDITSRGAV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCCH
SYMELARELMTREVRRG
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKIICIANQKGGVGKTTTAVNLAASLAAAEKQTLLVDMDPQGNAGSGVGVDKAGLEESV
CEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHCCHHHH
YDAIINDVDPSGLIVGTDLAHLDLLPSTTDLAGAELELVSMPERERRLKAALARLSQRYD
HHHHHHCCCCCCEEEECCHHEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
YIIIDCPPSLGLLTVNAMTAADSVLIPLQCEYYAMEGLSQIIKTIKLVQKGLNPGLAIEG
EEEEECCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
IVLTMYDGRNNLSRQVSEEIRGHFADIAFQTVIPRNVRLSEAPSHGRPVILYDITSRGAV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCCH
SYMELARELMTREVRRG
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]