Click here to switch to the map view.

The map label for this gene is rcp1 [H]

Identifier: 39995215

GI number: 39995215

Start: 120852

End: 121241

Strand: Direct

Name: rcp1 [H]

Synonym: GSU0104

Alternate gene names: 39995215

Gene position: 120852-121241 (Clockwise)

Preceding gene: 39995214

Following gene: 39995217

Centisome position: 3.17

GC content: 61.03

Gene sequence:

>390_bases
GTGGACACCAAGACGATACTACTTGTGGAGGACAATCCCGACGACGAGTTCCTTGCGCTACGGGCGTTGCGGCGTCATGG
GCTGCAGGACGTTGTCGTGGCCCGTGACGGAGAACAGGCGGTCGGCCAGCTCTTCGAGGCGGCCCCCCCCCTGGACCCCT
GGCTCGTGCTTCTCGACCTCAAGCTGCCGAAGATGAACGGCCTTGAGGTCTTGCGCACCATTCGCAGCGAAGAGCGTACC
CGGCATACTCCGGTCATCGTCATCAGCTCGTCCCAGGAGGAAACCGATGTGGTAAAATGCCGCGAACTGGGCGTTCTGGC
TTATCTGACGAAGCCCATTGATGGTGAGAAGATCATGGCGCTTCTCGCGACGGCGGGCCTGTCATTCTGA

Upstream 100 bases:

>100_bases
TCATTCAGCGTCACGGCGGGCGCATCTGGGCCGAAGGAGAGAGTGGAAAAGGTGCCGTATTTTTCTTCGTTTTTCCCGAT
TAATCGATAGAGGTGGGGTG

Downstream 100 bases:

>100_bases
CCGGCTCTGCGTCACGGCCCTCCGCCTGCTCGCAGCTCGCAGTGGCCGGGTGCAGGCGGGCTATTCTCCAGCCTGCGGTT
TCACCTTGTGACATTCAAGG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDTKTILLVEDNPDDEFLALRALRRHGLQDVVVARDGEQAVGQLFEAAPPLDPWLVLLDLKLPKMNGLEVLRTIRSEERT
RHTPVIVISSSQEETDVVKCRELGVLAYLTKPIDGEKIMALLATAGLSF

Sequences:

>Translated_129_residues
MDTKTILLVEDNPDDEFLALRALRRHGLQDVVVARDGEQAVGQLFEAAPPLDPWLVLLDLKLPKMNGLEVLRTIRSEERT
RHTPVIVISSSQEETDVVKCRELGVLAYLTKPIDGEKIMALLATAGLSF
>Mature_129_residues
MDTKTILLVEDNPDDEFLALRALRRHGLQDVVVARDGEQAVGQLFEAAPPLDPWLVLLDLKLPKMNGLEVLRTIRSEERT
RHTPVIVISSSQEETDVVKCRELGVLAYLTKPIDGEKIMALLATAGLSF

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=119, Percent_Identity=34.453781512605, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 14346; Mature: 14346

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKTILLVEDNPDDEFLALRALRRHGLQDVVVARDGEQAVGQLFEAAPPLDPWLVLLDL
CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEE
KLPKMNGLEVLRTIRSEERTRHTPVIVISSSQEETDVVKCRELGVLAYLTKPIDGEKIMA
CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCEEEEEECCCCHHHHHH
LLATAGLSF
HHHHHCCCC
>Mature Secondary Structure
MDTKTILLVEDNPDDEFLALRALRRHGLQDVVVARDGEQAVGQLFEAAPPLDPWLVLLDL
CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEE
KLPKMNGLEVLRTIRSEERTRHTPVIVISSSQEETDVVKCRELGVLAYLTKPIDGEKIMA
CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCEEEEEECCCCHHHHHH
LLATAGLSF
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]