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The map label for this gene is bphB [H]

Identifier: 39995214

GI number: 39995214

Start: 118723

End: 120834

Strand: Direct

Name: bphB [H]

Synonym: GSU0103

Alternate gene names: 39995214

Gene position: 118723-120834 (Clockwise)

Preceding gene: 39995213

Following gene: 39995215

Centisome position: 3.11

GC content: 58.24

Gene sequence:

>2112_bases
ATGGACAATGCACTGACGCTTCAACCCCTCGAACGAATTGTCACCGAACACGAAGGATGGCTTGCGGCTCGCGCGCTCGG
CTACGCCAAAAGCTGCGGCTACACGCGCTATACGTCCACGCTTGAAGAAGCCTGGCGGATTTCCATCGCTGGCCTTTCCG
CGTCGCTCATCCATGCTCTCCGGGCAAAAGAGCCGATTCCCGAGTTGTCGCCGGATTACGATTCCGTTGCAGACCCCGTT
ACGCTGTTCGGCATTGAGGAAGCCCGACGTCACCGCATGCGCGGTGTGACGCTCGGTATGTTCCTCGGCCTCATGAAATA
CTACCGCCGCAGCTACCAGGATCTGGTGCGCGGCAGTGGGGTGGATGAGAAAACCCTTGAATCCGGCCGGCTCTTCATCG
ACCGTTTTTTTGACCGTGTTGAAATTGGGTTCACCACTGAATGGTCATCGGTTTCCGATCCCCAGCGGCTTGCCGAACTG
GAGGAGGCCAACCGGTCCATCACCAACGAGAAGAACAGGCTCCTCACACTGTTTGAAAGCATCCCTTCTCCTGTTATGCT
TCTGGGTGCCGACGGCCGGCCAGTACTCATGAACCATGCTGCAGTCGAGTTATTCGCCGGTCCGACGCCGCCCGGCACGC
ATTACTATCGTGAGAGTGGAAGCCCAGGGCTGGAGGTGGCCGTCCCCCGCTGGAGCCGGCTGAAGCGTTTTCTGAAGGGG
AAGGCGCGGGAGGCGCGTTTCGAGGAGAGCATCGACACAGCTGCCGGGTGCCGGTATTTTCTGGTTACCGTGCAGCGGAT
GCTCGACGTCAGTGAAAAATTTTGCGGAACGACTATCATCCTTTCCGACCTCACCGGCCGCAAACTCGCCGAAGATGAAC
TCCAGCACCTTGTGGCAGAGATGGAAGATCGGATCAGGTCTCGAACCGCTGAATTGCTGGATGCGAACACGCGTCTGCTG
GAAGAGATTGAGGAGCGCCGCAGGTCTGAGCGCTTTTTCCACGCCACGATTGATTCTCTGACAGCTCCAGTTGCCATTTT
GAACGGCGAGGGGGACATCGTCACCGTCAACCGGGCTTGGCGAAAATTCGCCGATGAAAACGGGGGGCTTCACCCCAATC
ACTTCATTGGGTACAATTATCTCGGATTGTGCGATAACGTGAAGGGTGACGATGCCGTCACCGCTTCCGCTGTGGCGCGG
GGTATTCGAGAGTTGATAGCCGGCCGCATCAATGAGTTCCATGTGGATTATCCATGCCACTCCCCCGATGAGCAACGGTG
GTTCCAGGTCCGTGTCACGAGGCTTGAGAACGGCAGCCGTGGCCGGGTCGCCGTGGTCCATGAAAACATCTCCGAGGTGA
AGAAGGCCCAGGAGGAAATTCTGTCCCTGAACCGTAGCCTCGAGGAGCGAATCAGGCACCGGACCCAGCAGCTCGAATGC
TCTAACAGGGAGCTCGAAGGATTCTGCTACGCCGTATCCCATGATCTTCGCTCCCATCTGGCGAGGCTTGAGGGCCTTGG
CCGGGGACTGCTCGAAGACTGTTTCGCAGGTCTCGACAACCAGGCCCGTCACTATGCGGAGCGAATTTGCCGCATCAGTA
TGGACCTGCGCAGGGCCATTGACTCCTTGCTGGACCTCAGTCGGCTCGCTCGGTGCGAACTTTCTAACGTAACCGTGGAT
TTGAGTGGGGTGGCGGAGCGGGTCGCTGAAGAACTGCACCAGTTGCAGCCGTTAAGACGGGTGAGTTTTTCCCTTGAGCC
CGGCGTAATCGTGCGAGGTGACCCGCAGCTCCTGGAAACGGTCATGCGGCACTTGATGGGTAATGCATGGAAATTCACCA
GCCGCCGCGAGGACGCAGAGATAGCCTTCGGCTCGACCATGCTCCACGGTATGAAGACCTGCTTTGTGCGTGACAACGGC
GTCGGTTTCGACATGAGGTATGCCGGCACTCTGTTCCAGCCATTCCAGCGGCTTCATGGCCCTGCCGAGTTCGACGGCGC
CGGGATTGGACTGGCAACTGTGCAGAGGATCATTCAGCGTCACGGCGGGCGCATCTGGGCCGAAGGAGAGAGTGGAAAAG
GTGCCGTATTTTTCTTCGTTTTTCCCGATTAA

Upstream 100 bases:

>100_bases
TATTATTTCTCTGAATAATGCTTAATAGCTTTCGGCAGCTCAGAGGGAATTTTATTGGCCCGTACCATGGGTGTATTCAT
TTGTGTGGCTGGGTGCAGAC

Downstream 100 bases:

>100_bases
TCGATAGAGGTGGGGTGGTGGACACCAAGACGATACTACTTGTGGAGGACAATCCCGACGACGAGTTCCTTGCGCTACGG
GCGTTGCGGCGTCATGGGCT

Product: sensory box histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MDNALTLQPLERIVTEHEGWLAARALGYAKSCGYTRYTSTLEEAWRISIAGLSASLIHALRAKEPIPELSPDYDSVADPV
TLFGIEEARRHRMRGVTLGMFLGLMKYYRRSYQDLVRGSGVDEKTLESGRLFIDRFFDRVEIGFTTEWSSVSDPQRLAEL
EEANRSITNEKNRLLTLFESIPSPVMLLGADGRPVLMNHAAVELFAGPTPPGTHYYRESGSPGLEVAVPRWSRLKRFLKG
KAREARFEESIDTAAGCRYFLVTVQRMLDVSEKFCGTTIILSDLTGRKLAEDELQHLVAEMEDRIRSRTAELLDANTRLL
EEIEERRRSERFFHATIDSLTAPVAILNGEGDIVTVNRAWRKFADENGGLHPNHFIGYNYLGLCDNVKGDDAVTASAVAR
GIRELIAGRINEFHVDYPCHSPDEQRWFQVRVTRLENGSRGRVAVVHENISEVKKAQEEILSLNRSLEERIRHRTQQLEC
SNRELEGFCYAVSHDLRSHLARLEGLGRGLLEDCFAGLDNQARHYAERICRISMDLRRAIDSLLDLSRLARCELSNVTVD
LSGVAERVAEELHQLQPLRRVSFSLEPGVIVRGDPQLLETVMRHLMGNAWKFTSRREDAEIAFGSTMLHGMKTCFVRDNG
VGFDMRYAGTLFQPFQRLHGPAEFDGAGIGLATVQRIIQRHGGRIWAEGESGKGAVFFFVFPD

Sequences:

>Translated_703_residues
MDNALTLQPLERIVTEHEGWLAARALGYAKSCGYTRYTSTLEEAWRISIAGLSASLIHALRAKEPIPELSPDYDSVADPV
TLFGIEEARRHRMRGVTLGMFLGLMKYYRRSYQDLVRGSGVDEKTLESGRLFIDRFFDRVEIGFTTEWSSVSDPQRLAEL
EEANRSITNEKNRLLTLFESIPSPVMLLGADGRPVLMNHAAVELFAGPTPPGTHYYRESGSPGLEVAVPRWSRLKRFLKG
KAREARFEESIDTAAGCRYFLVTVQRMLDVSEKFCGTTIILSDLTGRKLAEDELQHLVAEMEDRIRSRTAELLDANTRLL
EEIEERRRSERFFHATIDSLTAPVAILNGEGDIVTVNRAWRKFADENGGLHPNHFIGYNYLGLCDNVKGDDAVTASAVAR
GIRELIAGRINEFHVDYPCHSPDEQRWFQVRVTRLENGSRGRVAVVHENISEVKKAQEEILSLNRSLEERIRHRTQQLEC
SNRELEGFCYAVSHDLRSHLARLEGLGRGLLEDCFAGLDNQARHYAERICRISMDLRRAIDSLLDLSRLARCELSNVTVD
LSGVAERVAEELHQLQPLRRVSFSLEPGVIVRGDPQLLETVMRHLMGNAWKFTSRREDAEIAFGSTMLHGMKTCFVRDNG
VGFDMRYAGTLFQPFQRLHGPAEFDGAGIGLATVQRIIQRHGGRIWAEGESGKGAVFFFVFPD
>Mature_703_residues
MDNALTLQPLERIVTEHEGWLAARALGYAKSCGYTRYTSTLEEAWRISIAGLSASLIHALRAKEPIPELSPDYDSVADPV
TLFGIEEARRHRMRGVTLGMFLGLMKYYRRSYQDLVRGSGVDEKTLESGRLFIDRFFDRVEIGFTTEWSSVSDPQRLAEL
EEANRSITNEKNRLLTLFESIPSPVMLLGADGRPVLMNHAAVELFAGPTPPGTHYYRESGSPGLEVAVPRWSRLKRFLKG
KAREARFEESIDTAAGCRYFLVTVQRMLDVSEKFCGTTIILSDLTGRKLAEDELQHLVAEMEDRIRSRTAELLDANTRLL
EEIEERRRSERFFHATIDSLTAPVAILNGEGDIVTVNRAWRKFADENGGLHPNHFIGYNYLGLCDNVKGDDAVTASAVAR
GIRELIAGRINEFHVDYPCHSPDEQRWFQVRVTRLENGSRGRVAVVHENISEVKKAQEEILSLNRSLEERIRHRTQQLEC
SNRELEGFCYAVSHDLRSHLARLEGLGRGLLEDCFAGLDNQARHYAERICRISMDLRRAIDSLLDLSRLARCELSNVTVD
LSGVAERVAEELHQLQPLRRVSFSLEPGVIVRGDPQLLETVMRHLMGNAWKFTSRREDAEIAFGSTMLHGMKTCFVRDNG
VGFDMRYAGTLFQPFQRLHGPAEFDGAGIGLATVQRIIQRHGGRIWAEGESGKGAVFFFVFPD

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=250, Percent_Identity=28, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1786912, Length=247, Percent_Identity=29.5546558704453, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1789149, Length=260, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 79410; Mature: 79410

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50109 HIS_KIN ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNALTLQPLERIVTEHEGWLAARALGYAKSCGYTRYTSTLEEAWRISIAGLSASLIHAL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCHHHHHHHHH
RAKEPIPELSPDYDSVADPVTLFGIEEARRHRMRGVTLGMFLGLMKYYRRSYQDLVRGSG
HHCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
VDEKTLESGRLFIDRFFDRVEIGFTTEWSSVSDPQRLAELEEANRSITNEKNRLLTLFES
CCHHHHHCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
IPSPVMLLGADGRPVLMNHAAVELFAGPTPPGTHYYRESGSPGLEVAVPRWSRLKRFLKG
CCCCEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCC
KAREARFEESIDTAAGCRYFLVTVQRMLDVSEKFCGTTIILSDLTGRKLAEDELQHLVAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
MEDRIRSRTAELLDANTRLLEEIEERRRSERFFHATIDSLTAPVAILNGEGDIVTVNRAW
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEHHHHH
RKFADENGGLHPNHFIGYNYLGLCDNVKGDDAVTASAVARGIRELIAGRINEFHVDYPCH
HHHHCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEEECCCCC
SPDEQRWFQVRVTRLENGSRGRVAVVHENISEVKKAQEEILSLNRSLEERIRHRTQQLEC
CCCHHHHHHEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SNRELEGFCYAVSHDLRSHLARLEGLGRGLLEDCFAGLDNQARHYAERICRISMDLRRAI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DSLLDLSRLARCELSNVTVDLSGVAERVAEELHQLQPLRRVSFSLEPGVIVRGDPQLLET
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEECCCHHHHHH
VMRHLMGNAWKFTSRREDAEIAFGSTMLHGMKTCFVRDNGVGFDMRYAGTLFQPFQRLHG
HHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHCC
PAEFDGAGIGLATVQRIIQRHGGRIWAEGESGKGAVFFFVFPD
CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MDNALTLQPLERIVTEHEGWLAARALGYAKSCGYTRYTSTLEEAWRISIAGLSASLIHAL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCHHHHHHHHH
RAKEPIPELSPDYDSVADPVTLFGIEEARRHRMRGVTLGMFLGLMKYYRRSYQDLVRGSG
HHCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
VDEKTLESGRLFIDRFFDRVEIGFTTEWSSVSDPQRLAELEEANRSITNEKNRLLTLFES
CCHHHHHCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
IPSPVMLLGADGRPVLMNHAAVELFAGPTPPGTHYYRESGSPGLEVAVPRWSRLKRFLKG
CCCCEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCC
KAREARFEESIDTAAGCRYFLVTVQRMLDVSEKFCGTTIILSDLTGRKLAEDELQHLVAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
MEDRIRSRTAELLDANTRLLEEIEERRRSERFFHATIDSLTAPVAILNGEGDIVTVNRAW
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEHHHHH
RKFADENGGLHPNHFIGYNYLGLCDNVKGDDAVTASAVARGIRELIAGRINEFHVDYPCH
HHHHCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEEECCCCC
SPDEQRWFQVRVTRLENGSRGRVAVVHENISEVKKAQEEILSLNRSLEERIRHRTQQLEC
CCCHHHHHHEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SNRELEGFCYAVSHDLRSHLARLEGLGRGLLEDCFAGLDNQARHYAERICRISMDLRRAI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DSLLDLSRLARCELSNVTVDLSGVAERVAEELHQLQPLRRVSFSLEPGVIVRGDPQLLET
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEECCCHHHHHH
VMRHLMGNAWKFTSRREDAEIAFGSTMLHGMKTCFVRDNGVGFDMRYAGTLFQPFQRLHG
HHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHCC
PAEFDGAGIGLATVQRIIQRHGGRIWAEGESGKGAVFFFVFPD
CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]