| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is mvhD [H]
Identifier: 39995200
GI number: 39995200
Start: 100019
End: 100519
Strand: Reverse
Name: mvhD [H]
Synonym: GSU0089
Alternate gene names: 39995200
Gene position: 100519-100019 (Counterclockwise)
Preceding gene: 39995201
Following gene: 39995199
Centisome position: 2.64
GC content: 62.28
Gene sequence:
>501_bases ATGCACATACACAAAGAGAAACACGCTTTCGAACCCAAGATCGTTGCCTTTGTCTGCACCTGGTGCACCTATGCCGGCGC CGACCTGGCCGGGACCTCGCGGATGCATTATCCCGCCAACGTCCGGGTGGTCAAGTTCCCCTGCACCGGCCGGATCGATC CAGTCTTCATCCTCAGGGCCTTCCAGAAAGGTGCAGACGGCATCCTGGTATCGGGTTGCCACCCGGGCGACTGCCACTAC ATGGCCGGCAACTTCCACGCGCGGCGCCGCTTCGCTGTTTTTCGCCAACTCCTGGACTTCATCGGAGTCGATCTCCAGCG GCTCCAGTTCTCCTGGGTTTCGGCCGCCGAGGGGGGGAAGTGGGTTGAGGTGGTGACCGAGCTGACCGAACGGGTTCGCG CCCAGGGGCCCATGCCCGAATTCAAGGAACTGGAAGCCGAGGAACACTGGTCCGGGGCCATCGACACGCCCGAGCTCAAT GCCGCGTACAACGACATCTGA
Upstream 100 bases:
>100_bases GCGGCGGCTGCGGCACCTGCCAGGCCACCTGCCCTTCAAAAAGCGTGGAGCTGGATGGCTACACCGACGAGCAGATCATG GCCATGATCGAGGTGCTCTA
Downstream 100 bases:
>100_bases AGCCGGCTCCCACGGAGCTTGCAAGGGTTCATCATGACGAATACCGCACATACTATCGACACGGCGCTCTATGACGCCGT CACCGACGCCCTGCGGGCGG
Product: heterodisulfide reductase subunit
Products: NA
Alternate protein names: Methyl viologen-reducing hydrogenase subunit delta; MVH subunit D [H]
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MHIHKEKHAFEPKIVAFVCTWCTYAGADLAGTSRMHYPANVRVVKFPCTGRIDPVFILRAFQKGADGILVSGCHPGDCHY MAGNFHARRRFAVFRQLLDFIGVDLQRLQFSWVSAAEGGKWVEVVTELTERVRAQGPMPEFKELEAEEHWSGAIDTPELN AAYNDI
Sequences:
>Translated_166_residues MHIHKEKHAFEPKIVAFVCTWCTYAGADLAGTSRMHYPANVRVVKFPCTGRIDPVFILRAFQKGADGILVSGCHPGDCHY MAGNFHARRRFAVFRQLLDFIGVDLQRLQFSWVSAAEGGKWVEVVTELTERVRAQGPMPEFKELEAEEHWSGAIDTPELN AAYNDI >Mature_166_residues MHIHKEKHAFEPKIVAFVCTWCTYAGADLAGTSRMHYPANVRVVKFPCTGRIDPVFILRAFQKGADGILVSGCHPGDCHY MAGNFHARRRFAVFRQLLDFIGVDLQRLQFSWVSAAEGGKWVEVVTELTERVRAQGPMPEFKELEAEEHWSGAIDTPELN AAYNDI
Specific function: Part of a complex that provides reducing equivalents for heterodisulfide reductase. MvhD may form the contact site to heterodisulfide reductase [H]
COG id: COG1908
COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mvhD/vhuD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003813 [H]
Pfam domain/function: PF02662 FlpD [H]
EC number: NA
Molecular weight: Translated: 18721; Mature: 18721
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIHKEKHAFEPKIVAFVCTWCTYAGADLAGTSRMHYPANVRVVKFPCTGRIDPVFILRA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHH FQKGADGILVSGCHPGDCHYMAGNFHARRRFAVFRQLLDFIGVDLQRLQFSWVSAAEGGK HHCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH WVEVVTELTERVRAQGPMPEFKELEAEEHWSGAIDTPELNAAYNDI HHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHIHKEKHAFEPKIVAFVCTWCTYAGADLAGTSRMHYPANVRVVKFPCTGRIDPVFILRA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHH FQKGADGILVSGCHPGDCHYMAGNFHARRRFAVFRQLLDFIGVDLQRLQFSWVSAAEGGK HHCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH WVEVVTELTERVRAQGPMPEFKELEAEEHWSGAIDTPELNAAYNDI HHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2654933; 9371463 [H]