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The map label for this gene is nodJ [H]

Identifier: 308513345

GI number: 308513345

Start: 3802531

End: 3803286

Strand: Reverse

Name: nodJ [H]

Synonym: NA

Alternate gene names: 308513345

Gene position: 3803286-3802531 (Counterclockwise)

Preceding gene: 39998545

Following gene: 39998543

Centisome position: 99.72

GC content: 61.51

Gene sequence:

>756_bases
GTGTTGACAGGCGCCTTTTCCATCTGGAAGCGCGACATGCTGGTGCTCCGCCGCAGCCTCTTCTCGGAACTGGCGGCGGT
GGTGGCCGCTCCCCTCACCTTTTACCTCGCCTTCGGCTTCGGCCTTCGCGGCTACATTGCCGATGTGGAAGGGGTGCCAT
ACACCGTGTTCATGGCGCCGGGGCTCATCACCATGACCGCCGTTTCTGCCGCCTTCGACGAGAGCGCCTGGAGCATGTGG
TTTCACCGTAAGGTTCAGCGGACCATCGAGGCTTACCGGGTCACCCCGATCACCGTCTACGATATCGTCATCGGCAAGAT
ATTCTCGGGTTTCACCCAGGGCGCCCTCAAGGGGGTGGCCGTGGCTGCGGTCATCTTCCTTCTCACCGGCGTCCGGTTCG
ACCCCACCCACCTGGTGGCCTATCTTTCCTTCATCATTCTTGGTTCCATGGTCTTTTCCTGTGCCGGGACGGTCTGCGGG
ACGCTCCTGGACAAACCCGAGACCATAGGCAAGGTTCAGGCAGTGGTCATTATGCCCCTCATCTTCCTGTCAGGGGTCTT
CTTCCCGGTATCGTCCTATCCCGAGGCGTTGCGAGCCACGGTCATGCTCATCCCCACCACGGCCCTGTTCGAGGGATCCC
GCAGGGCTCTCCTGGCAGGTGCTCTCGATGCCGGCCTGATTGCCATCCTCGCCATTACCGCTCTGGCCGCCTTCGTCGCC
ACGGTGGCCATCTTCAATCGAAAGATGGCAGAGTAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:
NA

Sequences:

>Translated_251_residues
MLTGAFSIWKRDMLVLRRSLFSELAAVVAAPLTFYLAFGFGLRGYIADVEGVPYTVFMAPGLITMTAVSAAFDESAWSMW
FHRKVQRTIEAYRVTPITVYDIVIGKIFSGFTQGALKGVAVAAVIFLLTGVRFDPTHLVAYLSFIILGSMVFSCAGTVCG
TLLDKPETIGKVQAVVIMPLIFLSGVFFPVSSYPEALRATVMLIPTTALFEGSRRALLAGALDAGLIAILAITALAAFVA
TVAIFNRKMAE
>Mature_251_residues
MLTGAFSIWKRDMLVLRRSLFSELAAVVAAPLTFYLAFGFGLRGYIADVEGVPYTVFMAPGLITMTAVSAAFDESAWSMW
FHRKVQRTIEAYRVTPITVYDIVIGKIFSGFTQGALKGVAVAAVIFLLTGVRFDPTHLVAYLSFIILGSMVFSCAGTVCG
TLLDKPETIGKVQAVVIMPLIFLSGVFFPVSSYPEALRATVMLIPTTALFEGSRRALLAGALDAGLIAILAITALAAFVA
TVAIFNRKMAE

Specific function: Part of the ABC transporter complex nodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=226, Percent_Identity=27.4336283185841, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- InterPro:   IPR005981 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27011; Mature: 27011

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGAFSIWKRDMLVLRRSLFSELAAVVAAPLTFYLAFGFGLRGYIADVEGVPYTVFMAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECC
GLITMTAVSAAFDESAWSMWFHRKVQRTIEAYRVTPITVYDIVIGKIFSGFTQGALKGVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAAVIFLLTGVRFDPTHLVAYLSFIILGSMVFSCAGTVCGTLLDKPETIGKVQAVVIMPL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IFLSGVFFPVSSYPEALRATVMLIPTTALFEGSRRALLAGALDAGLIAILAITALAAFVA
HHHHHHHHCHHCCHHHHHHHHHEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAIFNRKMAE
HHHHHHHHHCC
>Mature Secondary Structure
MLTGAFSIWKRDMLVLRRSLFSELAAVVAAPLTFYLAFGFGLRGYIADVEGVPYTVFMAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECC
GLITMTAVSAAFDESAWSMWFHRKVQRTIEAYRVTPITVYDIVIGKIFSGFTQGALKGVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAAVIFLLTGVRFDPTHLVAYLSFIILGSMVFSCAGTVCGTLLDKPETIGKVQAVVIMPL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IFLSGVFFPVSSYPEALRATVMLIPTTALFEGSRRALLAGALDAGLIAILAITALAAFVA
HHHHHHHHCHHCCHHHHHHHHHEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAIFNRKMAE
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3019841; 3419422 [H]