| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is aroF [H]
Identifier: 308513343
GI number: 308513343
Start: 3662036
End: 3662977
Strand: Reverse
Name: aroF [H]
Synonym: NA
Alternate gene names: 308513343
Gene position: 3662977-3662036 (Counterclockwise)
Preceding gene: 39998435
Following gene: 39998421
Centisome position: 96.04
GC content: 64.97
Gene sequence:
>942_bases ATGGGACTTACGGCGGCGCCCATTCCCGGCAGCGAACGGACAGCCATCGGCGTCCTCGGCAATCACGGGTATGTGGATGA TACCACCATCCGGGATCTGCCCGGCGTTCAGGAGGTCATCCATGTCTCCAAACCCTATAAGCTCGTTTCCCGCGACTTCC ACCCGCGCCATACGGTGGTGAAGGTGGGCGACGTGGCCATCGGCGAGGGGAAGCGCCCTGTAGTGGTGGCCGGCCCCTGC GCCGTGGAAGGGGAGGAGCAGATCGTCCGGACCGCGCGGGCGGTGAAAAAATACGGAGCTGATCTTCTGCGGGGGGGCGC CTTCAAACCCCGCACCGGTCCCCATACCTTCCAGGGGCTGCGGGAGGAAGGGCTGAAGCTTCTGGCCATTGCCCGCCGGG AGACGGGACTTCCCATCGTGACCGAGGTCATGAGTCCCGACACGGTGGGACTTGTGGCGGAATATGCCGACCTCCTCCAG GTTGGCGCGCGCAACATGCAAAACTTCGAACTGCTCAAGGAGTTGGGCCGAATCCGCAAGCCAGTGCTCCTCAAGCGGGG GATGAGTGCTACTCTGGAGGAATTTCTGGCCGCGGCCGAATACATTTTGGCTGAGGGCAACGGCCAGGTGATCCTCTGCG AGCGGGGGATCCGGACCTTCGAGACCGCCACCCGCAATACCCTCGACCTGGCGGTGGTGCCCCTCATCCGGGAGATGACC CATCTGCCGGTCATGGTTGACCCCTCCCACGCCACCGGAAAGCGGAGCCTCGTGGCGCCCATGGCCAAGGCGGCGCTGGT GGCAGGAGCCCACGGTGTCCTCGTGGAGGTCCACCCGGAGCCGGACAAGGCCCTCTCGGACGGCCCCCAGTCTCTCACTT TCCACGGCTTCGAGGCACTCATGGGCGAGATCCGGCGGCTCAACGAGTTCCTCGGCTTCTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
NA
Sequences:
>Translated_313_residues MGLTAAPIPGSERTAIGVLGNHGYVDDTTIRDLPGVQEVIHVSKPYKLVSRDFHPRHTVVKVGDVAIGEGKRPVVVAGPC AVEGEEQIVRTARAVKKYGADLLRGGAFKPRTGPHTFQGLREEGLKLLAIARRETGLPIVTEVMSPDTVGLVAEYADLLQ VGARNMQNFELLKELGRIRKPVLLKRGMSATLEEFLAAAEYILAEGNGQVILCERGIRTFETATRNTLDLAVVPLIREMT HLPVMVDPSHATGKRSLVAPMAKAALVAGAHGVLVEVHPEPDKALSDGPQSLTFHGFEALMGEIRRLNEFLGF >Mature_312_residues GLTAAPIPGSERTAIGVLGNHGYVDDTTIRDLPGVQEVIHVSKPYKLVSRDFHPRHTVVKVGDVAIGEGKRPVVVAGPCA VEGEEQIVRTARAVKKYGADLLRGGAFKPRTGPHTFQGLREEGLKLLAIARRETGLPIVTEVMSPDTVGLVAEYADLLQV GARNMQNFELLKELGRIRKPVLLKRGMSATLEEFLAAAEYILAEGNGQVILCERGIRTFETATRNTLDLAVVPLIREMTH LPVMVDPSHATGKRSLVAPMAKAALVAGAHGVLVEVHPEPDKALSDGPQSLTFHGFEALMGEIRRLNEFLGF
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=283, Percent_Identity=24.7349823321555, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 33807; Mature: 33676
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTAAPIPGSERTAIGVLGNHGYVDDTTIRDLPGVQEVIHVSKPYKLVSRDFHPRHTVV CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHCCCCHHHHHCCCCCCCEEE KVGDVAIGEGKRPVVVAGPCAVEGEEQIVRTARAVKKYGADLLRGGAFKPRTGPHTFQGL EECCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHH REEGLKLLAIARRETGLPIVTEVMSPDTVGLVAEYADLLQVGARNMQNFELLKELGRIRK HHCCCEEEEEHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC PVLLKRGMSATLEEFLAAAEYILAEGNGQVILCERGIRTFETATRNTLDLAVVPLIREMT HHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH HLPVMVDPSHATGKRSLVAPMAKAALVAGAHGVLVEVHPEPDKALSDGPQSLTFHGFEAL HCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCEEHHHHHHH MGEIRRLNEFLGF HHHHHHHHHHHCC >Mature Secondary Structure GLTAAPIPGSERTAIGVLGNHGYVDDTTIRDLPGVQEVIHVSKPYKLVSRDFHPRHTVV CCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHCCCCHHHHHCCCCCCCEEE KVGDVAIGEGKRPVVVAGPCAVEGEEQIVRTARAVKKYGADLLRGGAFKPRTGPHTFQGL EECCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHH REEGLKLLAIARRETGLPIVTEVMSPDTVGLVAEYADLLQVGARNMQNFELLKELGRIRK HHCCCEEEEEHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC PVLLKRGMSATLEEFLAAAEYILAEGNGQVILCERGIRTFETATRNTLDLAVVPLIREMT HHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHH HLPVMVDPSHATGKRSLVAPMAKAALVAGAHGVLVEVHPEPDKALSDGPQSLTFHGFEAL HCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCEEHHHHHHH MGEIRRLNEFLGF HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]