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The map label for this gene is 39998421

Identifier: 39998421

GI number: 39998421

Start: 3661539

End: 3661886

Strand: Reverse

Name: 39998421

Synonym: GSU3332

Alternate gene names: NA

Gene position: 3661886-3661539 (Counterclockwise)

Preceding gene: 308513343

Following gene: 39998420

Centisome position: 96.01

GC content: 61.49

Gene sequence:

>348_bases
ATGCTCACCCGAGTTTTCACACTTCTGGCATTCGTGGCCATGCTGTCGCTGGCCAGCGGTTGCGCCATGCTGATGTCCTG
GAAGGCTATTCCTCCGCCGGGCGGTTGCGATCAGTGCCATACCGTTCCCATCAGCGCAAACTGGCAGGTATCCTATCGCA
CCGTTGCCCTGACCGATGAGCGCGGCAGCGACCGCCCCTACTTCCAGACCGAGACGTACAACGTTCCCCCCACCGATCGT
CCGCGGTCGAGCCTCGACATCCGCAAGGTGGACGAACTTCCCTGCTTCGAGTGCCACAAGTCTCCGAGTCCGGCCCATAA
GGGACGGGTCGGCAAATTCCACCACTGA

Upstream 100 bases:

>100_bases
TGCCTTTCAAGGGGGTTACGCCACCCACCGGGTTTGTTTTGCCCTCCTCTTGTGCTATGCTTTCTCATGCCGTAAACGAC
CACCCATCAAGGAGTGCCTC

Downstream 100 bases:

>100_bases
CGCCTATGCCGAAGCCCATGGATACACTGTCACGCAAAACCAAGATCATCGCCACTCTGGGGCCCGTCAGCTCCTCGCCC
GACATGATCCGGCAGCTGAT

Product: cytochrome C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLTRVFTLLAFVAMLSLASGCAMLMSWKAIPPPGGCDQCHTVPISANWQVSYRTVALTDERGSDRPYFQTETYNVPPTDR
PRSSLDIRKVDELPCFECHKSPSPAHKGRVGKFHH

Sequences:

>Translated_115_residues
MLTRVFTLLAFVAMLSLASGCAMLMSWKAIPPPGGCDQCHTVPISANWQVSYRTVALTDERGSDRPYFQTETYNVPPTDR
PRSSLDIRKVDELPCFECHKSPSPAHKGRVGKFHH
>Mature_115_residues
MLTRVFTLLAFVAMLSLASGCAMLMSWKAIPPPGGCDQCHTVPISANWQVSYRTVALTDERGSDRPYFQTETYNVPPTDR
PRSSLDIRKVDELPCFECHKSPSPAHKGRVGKFHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12862; Mature: 12862

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRVFTLLAFVAMLSLASGCAMLMSWKAIPPPGGCDQCHTVPISANWQVSYRTVALTDE
CHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEECC
RGSDRPYFQTETYNVPPTDRPRSSLDIRKVDELPCFECHKSPSPAHKGRVGKFHH
CCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTRVFTLLAFVAMLSLASGCAMLMSWKAIPPPGGCDQCHTVPISANWQVSYRTVALTDE
CHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEECC
RGSDRPYFQTETYNVPPTDRPRSSLDIRKVDELPCFECHKSPSPAHKGRVGKFHH
CCCCCCCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA