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The map label for this gene is ybeX [C]

Identifier: 308513314

GI number: 308513314

Start: 2498496

End: 2499248

Strand: Reverse

Name: ybeX [C]

Synonym: NA

Alternate gene names: 308513314

Gene position: 2499248-2498496 (Counterclockwise)

Preceding gene: 39997381

Following gene: 39997379

Centisome position: 65.53

GC content: 59.1

Gene sequence:

>753_bases
ATGGATGCCGGTGAAGAGGAAGGGATCATCAACGAAGAAGAAAACGCGATGATCCGCTCCATCTTCGAGTTGCGGGACAC
CATCGTCCGCGAGATCATGGTGCCGCGGACCGACATGGCCTGCGTATCGGCGGATGCCGCGGTGGCGAACGTCCTTAATA
CCATTATCAGCTGCGGGCACTCCCGCATCCCGGTCTACGACGGTACCGTGGACAACATCATCGGCCTCATTTACGCCAAA
GACCTCCTCAAATACTGGGGCATGAGCGAACCCGCCATCGATCTCAAGCGGATCATGCGGGCCCCCTACTTCATTCCCGA
GACTAAAAACCTCGAGGAGCTGCTCCAGGAATTCAAGCGGAAGCGGGTTCACATCGCCATCGTCATCGACGAGTACGGCG
GCACCTCGGGACTCGTTACCATCGAGGACCTGCTGGAGCAGATCGTGGGTGACATTCAGGATGAGTACGACCTGGAAGAG
GAATGGCTGGAGGAGGAGCCCGACGGCTCGATCCTGGTCGATGCCCGGCTGCCCATCGAGGATCTGGAGGAGTATTTCGG
CATCGAGGTTGAGCGGGAAAAATTCGACACGGTGGCAGGTCTCATCTTCCATCTCACCGGGCGGATTCCCATGGTGAGGG
AGGAAGTCGAGAGCGACACCCTGCGCATGACCGTCCTGGAGGCCGGCGAACGTAACATTAAGAAAGTACGGATCGCCCGC
CGCAGTGACGAGGCCGGGGAGGCCCAATCGTAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:
NA

Sequences:

>Translated_250_residues
MDAGEEEGIINEEENAMIRSIFELRDTIVREIMVPRTDMACVSADAAVANVLNTIISCGHSRIPVYDGTVDNIIGLIYAK
DLLKYWGMSEPAIDLKRIMRAPYFIPETKNLEELLQEFKRKRVHIAIVIDEYGGTSGLVTIEDLLEQIVGDIQDEYDLEE
EWLEEEPDGSILVDARLPIEDLEEYFGIEVEREKFDTVAGLIFHLTGRIPMVREEVESDTLRMTVLEAGERNIKKVRIAR
RSDEAGEAQS
>Mature_250_residues
MDAGEEEGIINEEENAMIRSIFELRDTIVREIMVPRTDMACVSADAAVANVLNTIISCGHSRIPVYDGTVDNIIGLIYAK
DLLKYWGMSEPAIDLKRIMRAPYFIPETKNLEELLQEFKRKRVHIAIVIDEYGGTSGLVTIEDLLEQIVGDIQDEYDLEE
EWLEEEPDGSILVDARLPIEDLEEYFGIEVEREKFDTVAGLIFHLTGRIPMVREEVESDTLRMTVLEAGERNIKKVRIAR
RSDEAGEAQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=198, Percent_Identity=35.3535353535354, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI94681046, Length=163, Percent_Identity=33.1288343558282, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI40068053, Length=163, Percent_Identity=31.9018404907975, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI40068055, Length=163, Percent_Identity=31.9018404907975, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI40068049, Length=146, Percent_Identity=34.2465753424658, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1786879, Length=238, Percent_Identity=34.453781512605, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI87082033, Length=243, Percent_Identity=30.0411522633745, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=31.9327731092437, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI145693175, Length=240, Percent_Identity=28.3333333333333, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790664, Length=248, Percent_Identity=24.1935483870968, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 28405; Mature: 28405

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00338 SOMATOTROPIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAGEEEGIINEEENAMIRSIFELRDTIVREIMVPRTDMACVSADAAVANVLNTIISCGH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SRIPVYDGTVDNIIGLIYAKDLLKYWGMSEPAIDLKRIMRAPYFIPETKNLEELLQEFKR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KRVHIAIVIDEYGGTSGLVTIEDLLEQIVGDIQDEYDLEEEWLEEEPDGSILVDARLPIE
CCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCHH
DLEEYFGIEVEREKFDTVAGLIFHLTGRIPMVREEVESDTLRMTVLEAGERNIKKVRIAR
HHHHHHCCEECHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH
RSDEAGEAQS
CCCCCCCCCC
>Mature Secondary Structure
MDAGEEEGIINEEENAMIRSIFELRDTIVREIMVPRTDMACVSADAAVANVLNTIISCGH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SRIPVYDGTVDNIIGLIYAKDLLKYWGMSEPAIDLKRIMRAPYFIPETKNLEELLQEFKR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KRVHIAIVIDEYGGTSGLVTIEDLLEQIVGDIQDEYDLEEEWLEEEPDGSILVDARLPIE
CCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCHH
DLEEYFGIEVEREKFDTVAGLIFHLTGRIPMVREEVESDTLRMTVLEAGERNIKKVRIAR
HHHHHHCCEECHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH
RSDEAGEAQS
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]