| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yyaL [H]
Identifier: 308513297
GI number: 308513297
Start: 1274758
End: 1276890
Strand: Direct
Name: yyaL [H]
Synonym: NA
Alternate gene names: 308513297
Gene position: 1274758-1276890 (Clockwise)
Preceding gene: 39996270
Following gene: 39996274
Centisome position: 33.42
GC content: 65.68
Gene sequence:
>2133_bases ATGGGCAATGAAGCGCGGCACCACGATGAACAACGGATCGAGCGCATCTTTTCGGCGGACCGGCGGACGCTCCCGCCTGA CGGCGGTCCACACTTCAACCGGCTCATCTTTGCCACGAGCCCCTATCTCCTCCAGCACGCCGACAACCCGGTGGAGTGGT ATCCCTGGGGAGAGGATGCCTTTGCGCGGGCACGGGCGGAGGATCGTCCGGTTTTCCTTTCCATCGGCTACGCCACCTGC CACTGGTGCCACGTCATGGCCGCCGAGTCCTTCGACGATGACGAGGTGGCCGCGGTCCTGAACCGGGAGTACGTGCCGGT GAAGGTTGACCGGGAAGAGCGCCCCGACATAGACGATACCTTTATGCGCGTCGCGCAGATGATGAACGGCAGCGGCGGCT GGCCTCTCACCATCATCATGACCCCCGACCGGCAACCTTTTTTTGCAGCCACCTATATTCCCCGGCGCTCCCGGGGCGGC ATGCCGGGGCTGATCGATCTCCTGGAAAAGATTGCCGAGGTCTGGCGACAGCGGCGGGACGTGGTCAGGCAGAATTGTTC CGCCATCATGGATGCCCTGTCGCGGTTCAACTCCGTCCGTCCAGCCGCCGCCGAGGATGAGGCGCCGCTCCACGGCGCAC GGCAGCAGCTGGCGGATATCTATGACAAAGAGTTCGGCGGCTTCGGCGGAGCGCCCAAATTTCCCATGGCCATGAACCTC TCCTTTCTTCTGCGCTACGGCCAGCGATACGGCGACGGCGAGGCCGTGGCCATGGCCACGGATACCCTCACCGCCATGGC GCAAGGAGGCATCTGGGACCACCTGGGCGGCGGCTTCCATCGCTACACCGTGGATGGCCGCTGGCTCGTGCCGCATTTCG AAAAAATGCTCTACGATCAGGCCCTCTGCACCCTTGCGCTGGTCGAGGCCGCACAGGTTACGGGGAACAGTGTCTTCAGG GAACTGGCAAAGGAAACCTGCGGCTTTGTCCTGCGGGAACTTTCCGCGCCGGCCGGGGGCTTCTACTCGGCTCTGGATGC CGATTCTGAGGGGCGGGAGGGGGCCTGTTACCTCTGGACTCCTGCCCAGGTGCGGGATATCCTCGGGGTGGCCGACGGCG AATTATTCTGCCGCCTCTATGCTGTTACCGCGTGGGGAAATTTCGAGGGTGCGAACGTGCTCCACCTTCCCCTTGCTCCC GATGCCTTCGCCCGGGACGAGGGAGTTGACCCCCTTCGCCTGCAGGAAAAGATTGCCCAGTGGCACATTCTGCTTCTGGA GGCGCGGGAGCGGCGGCCACGCCCCTTCCGCGACGAGAAGATCATCACCGGCTGGAACGGACTCATGATTGCGGCCCTGG CCCGCACGTTCCTGATCTGCGGCGATGAGCTCCTGCTGGAGGGCGCCGAACGGGCAGTGCGGCGTGTGTGCATTGATCTC CGTACGCCGGCGGGGCGGCTGGTGCGCAGCTGTCATCGGGGCGAGGCGAGCGGTCCCGGTTTCCTGGAGGACTATGCATT TTTCATTCGCGGCCTCCTTGAGCTGCACGAAGCCACTCTCGACCCCCGGCATCTGGCCCTGGCCCGTTCGCTGGCCCACG ACATGCTCCGGCTTTTCGGTGACAGCGGGGGAGGGCTCTTTGATACGGGGAGCGATGCGGAAACGATCCTCGTGCGGGGC AAGGGCGCGCTGGACGGCGCCATCCCTTCGGGCAACGCCATGGCCGCATCGGTTCTGATCCGCCTCGGCAGGATAACCGG CGACGGCGTATTCGAGGAGGCAGGGCGCGGCATCATCCGGGCGTTTCTGGCCGGGGCAGCCCGACAGCCTGCAGCACACA TCCATCTCCTCTGCGCCCTGGGCGAACTCCTGGCCGACCCGTTCGAGGTTGTGATCGCCGCGGCGACCAGGCCGCATGCC GTGCGGGAGTTGCTCTGTATCCTCGGTGGCCGCCTGATTCCCGGACTGGTCCTGATGGAACGGGAAGAGAATGCGCCGGC GCGGGAGGGGGGGGGAGGCGGGAGCATCGCCCGCGTCTGCGCGGGCAGGGTCTGTCTGCCGCCGGTCACGGCGCCCGAAG GGCTGGAGGAAATCCTGGCCAGGCACATAATCCGGCCGGTCCGACCGGGGTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
NA
Sequences:
>Translated_710_residues MGNEARHHDEQRIERIFSADRRTLPPDGGPHFNRLIFATSPYLLQHADNPVEWYPWGEDAFARARAEDRPVFLSIGYATC HWCHVMAAESFDDDEVAAVLNREYVPVKVDREERPDIDDTFMRVAQMMNGSGGWPLTIIMTPDRQPFFAATYIPRRSRGG MPGLIDLLEKIAEVWRQRRDVVRQNCSAIMDALSRFNSVRPAAAEDEAPLHGARQQLADIYDKEFGGFGGAPKFPMAMNL SFLLRYGQRYGDGEAVAMATDTLTAMAQGGIWDHLGGGFHRYTVDGRWLVPHFEKMLYDQALCTLALVEAAQVTGNSVFR ELAKETCGFVLRELSAPAGGFYSALDADSEGREGACYLWTPAQVRDILGVADGELFCRLYAVTAWGNFEGANVLHLPLAP DAFARDEGVDPLRLQEKIAQWHILLLEARERRPRPFRDEKIITGWNGLMIAALARTFLICGDELLLEGAERAVRRVCIDL RTPAGRLVRSCHRGEASGPGFLEDYAFFIRGLLELHEATLDPRHLALARSLAHDMLRLFGDSGGGLFDTGSDAETILVRG KGALDGAIPSGNAMAASVLIRLGRITGDGVFEEAGRGIIRAFLAGAARQPAAHIHLLCALGELLADPFEVVIAAATRPHA VRELLCILGGRLIPGLVLMEREENAPAREGGGGGSIARVCAGRVCLPPVTAPEGLEEILARHIIRPVRPG >Mature_709_residues GNEARHHDEQRIERIFSADRRTLPPDGGPHFNRLIFATSPYLLQHADNPVEWYPWGEDAFARARAEDRPVFLSIGYATCH WCHVMAAESFDDDEVAAVLNREYVPVKVDREERPDIDDTFMRVAQMMNGSGGWPLTIIMTPDRQPFFAATYIPRRSRGGM PGLIDLLEKIAEVWRQRRDVVRQNCSAIMDALSRFNSVRPAAAEDEAPLHGARQQLADIYDKEFGGFGGAPKFPMAMNLS FLLRYGQRYGDGEAVAMATDTLTAMAQGGIWDHLGGGFHRYTVDGRWLVPHFEKMLYDQALCTLALVEAAQVTGNSVFRE LAKETCGFVLRELSAPAGGFYSALDADSEGREGACYLWTPAQVRDILGVADGELFCRLYAVTAWGNFEGANVLHLPLAPD AFARDEGVDPLRLQEKIAQWHILLLEARERRPRPFRDEKIITGWNGLMIAALARTFLICGDELLLEGAERAVRRVCIDLR TPAGRLVRSCHRGEASGPGFLEDYAFFIRGLLELHEATLDPRHLALARSLAHDMLRLFGDSGGGLFDTGSDAETILVRGK GALDGAIPSGNAMAASVLIRLGRITGDGVFEEAGRGIIRAFLAGAARQPAAHIHLLCALGELLADPFEVVIAAATRPHAV RELLCILGGRLIPGLVLMEREENAPAREGGGGGSIARVCAGRVCLPPVTAPEGLEEILARHIIRPVRPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=728, Percent_Identity=37.0879120879121, Blast_Score=434, Evalue=1e-121, Organism=Caenorhabditis elegans, GI25147430, Length=718, Percent_Identity=31.7548746518106, Blast_Score=354, Evalue=8e-98, Organism=Drosophila melanogaster, GI20129985, Length=732, Percent_Identity=33.1967213114754, Blast_Score=400, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 77964; Mature: 77833
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEARHHDEQRIERIFSADRRTLPPDGGPHFNRLIFATSPYLLQHADNPVEWYPWGEDA CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCEEECCCHHH FARARAEDRPVFLSIGYATCHWCHVMAAESFDDDEVAAVLNREYVPVKVDREERPDIDDT HHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHH FMRVAQMMNGSGGWPLTIIMTPDRQPFFAATYIPRRSRGGMPGLIDLLEKIAEVWRQRRD HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH VVRQNCSAIMDALSRFNSVRPAAAEDEAPLHGARQQLADIYDKEFGGFGGAPKFPMAMNL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH SFLLRYGQRYGDGEAVAMATDTLTAMAQGGIWDHLGGGFHRYTVDGRWLVPHFEKMLYDQ HHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHCCCCEEEEEECCEEEHHHHHHHHHHH ALCTLALVEAAQVTGNSVFRELAKETCGFVLRELSAPAGGFYSALDADSEGREGACYLWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEC PAQVRDILGVADGELFCRLYAVTAWGNFEGANVLHLPLAPDAFARDEGVDPLRLQEKIAQ HHHHHHHHHCCCCHHEEEEEEEEECCCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHHH WHILLLEARERRPRPFRDEKIITGWNGLMIAALARTFLICGDELLLEGAERAVRRVCIDL HHHHEEEHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC RTPAGRLVRSCHRGEASGPGFLEDYAFFIRGLLELHEATLDPRHLALARSLAHDMLRLFG CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DSGGGLFDTGSDAETILVRGKGALDGAIPSGNAMAASVLIRLGRITGDGVFEEAGRGIIR CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AFLAGAARQPAAHIHLLCALGELLADPFEVVIAAATRPHAVRELLCILGGRLIPGLVLME HHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCHHHCCEEEEE REENAPAREGGGGGSIARVCAGRVCLPPVTAPEGLEEILARHIIRPVRPG CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GNEARHHDEQRIERIFSADRRTLPPDGGPHFNRLIFATSPYLLQHADNPVEWYPWGEDA CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCEEECCCHHH FARARAEDRPVFLSIGYATCHWCHVMAAESFDDDEVAAVLNREYVPVKVDREERPDIDDT HHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHH FMRVAQMMNGSGGWPLTIIMTPDRQPFFAATYIPRRSRGGMPGLIDLLEKIAEVWRQRRD HHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH VVRQNCSAIMDALSRFNSVRPAAAEDEAPLHGARQQLADIYDKEFGGFGGAPKFPMAMNL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH SFLLRYGQRYGDGEAVAMATDTLTAMAQGGIWDHLGGGFHRYTVDGRWLVPHFEKMLYDQ HHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHCCCCEEEEEECCEEEHHHHHHHHHHH ALCTLALVEAAQVTGNSVFRELAKETCGFVLRELSAPAGGFYSALDADSEGREGACYLWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEC PAQVRDILGVADGELFCRLYAVTAWGNFEGANVLHLPLAPDAFARDEGVDPLRLQEKIAQ HHHHHHHHHCCCCHHEEEEEEEEECCCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHHH WHILLLEARERRPRPFRDEKIITGWNGLMIAALARTFLICGDELLLEGAERAVRRVCIDL HHHHEEEHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC RTPAGRLVRSCHRGEASGPGFLEDYAFFIRGLLELHEATLDPRHLALARSLAHDMLRLFG CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DSGGGLFDTGSDAETILVRGKGALDGAIPSGNAMAASVLIRLGRITGDGVFEEAGRGIIR CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AFLAGAARQPAAHIHLLCALGELLADPFEVVIAAATRPHAVRELLCILGGRLIPGLVLME HHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCHHHCCEEEEE REENAPAREGGGGGSIARVCAGRVCLPPVTAPEGLEEILARHIIRPVRPG CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]