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The map label for this gene is yecS [H]

Identifier: 308513288

GI number: 308513288

Start: 856504

End: 857304

Strand: Reverse

Name: yecS [H]

Synonym: NA

Alternate gene names: 308513288

Gene position: 857304-856504 (Counterclockwise)

Preceding gene: 308513289

Following gene: 39995904

Centisome position: 22.48

GC content: 61.92

Gene sequence:

>801_bases
ATGCAGATCGCCAAGCTCCACTTCGCGGCCAAGGAGATGGACGAGGCCCTGGCCGCGGCCCGGGAGGTGCTTTCCCTCTA
CCCCGACAACAGTGAGGCGAAAAACTTCACGGCCTCGGTGGAGCGGGAGAAGAAGCCCGGCTACGTCACGTTCCTTCAGG
ACTGCCTGAAGTTCCTGCCGGTGCTTCTCAAGGGTGCGGTGATGACGCTCCTGCTGGTGCTCTGCACCATGTTCATCTCT
CCCATCGGCGGGCTCCTCATCGCCTTGGGGCGGATCAGCACCTTCAGGCCCCTGTCGGCCCTCTGCTGGTTCGTCATCTG
GCTCTTCCGGGGCACCCCCCTCCTGCTTCAGCTCTTCTTCATCTACTACGGCCTCCCCTCCCTCGGCATCACCCTCAAAC
CCATCACCGCCGCGGTCATCGGCCTGGGGCTCAACTACTCGGCCTACCTTGGCGAGATCATCCGGGGAGCCATTCAGAGC
ATCGACCACGGCCAGACCGAGGCAGCCAAGGCCCTGGGCATGACCTATGGCCAAACCATGCGCCGGGTCGTCATCCCCCA
GACCTACAAGCGGCTCATGCCCCCCATCGGCAACGAGTTCATCGCCCTGATCAAGGACACGGCCCTGGTTTCCACCATTG
CCATGGTAGAGCTGATGCGGGCCGCGGACCAGATGTTCAACACCTACTTCAACGTGACGGCCCTCGTCCTGGCCGCCGTC
ATCTACCTGATCTTCACGACCTTCTTCACCTTCCTCTTCGAAAAGATCGAGCACCGGGCAGGGATCTATGAGCGACGTTA
A

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:
NA

Sequences:

>Translated_266_residues
MQIAKLHFAAKEMDEALAAAREVLSLYPDNSEAKNFTASVEREKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFIS
PIGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQLFFIYYGLPSLGITLKPITAAVIGLGLNYSAYLGEIIRGAIQS
IDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRAADQMFNTYFNVTALVLAAV
IYLIFTTFFTFLFEKIEHRAGIYERR
>Mature_266_residues
MQIAKLHFAAKEMDEALAAAREVLSLYPDNSEAKNFTASVEREKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFIS
PIGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQLFFIYYGLPSLGITLKPITAAVIGLGLNYSAYLGEIIRGAIQS
IDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRAADQMFNTYFNVTALVLAAV
IYLIFTTFFTFLFEKIEHRAGIYERR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=46.2962962962963, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=35.7487922705314, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787087, Length=235, Percent_Identity=30.2127659574468, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787086, Length=223, Percent_Identity=33.1838565022422, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=33.495145631068, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=32.4444444444444, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1786873, Length=173, Percent_Identity=33.5260115606936, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082239, Length=198, Percent_Identity=32.8282828282828, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786874, Length=219, Percent_Identity=29.2237442922374, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI48994930, Length=168, Percent_Identity=29.7619047619048, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29725; Mature: 29725

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50293 TPR_REGION ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]