Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 308513289

GI number: 308513289

Start: 857663

End: 858454

Strand: Reverse

Name: fliY [H]

Synonym: NA

Alternate gene names: 308513289

Gene position: 858454-857663 (Counterclockwise)

Preceding gene: 39995907

Following gene: 308513288

Centisome position: 22.51

GC content: 60.1

Gene sequence:

>792_bases
GTGAAAAAACTCGTATTGCTGATGGTCTCTGCCCTGCTCGTTGCTTTTGCCGCAACCGCCTTCGCGGCCGACGGTTCCTG
GAACCGGGTCAAATCCGCCGGGAAACTTGTCATCGGCCTCGATGACGCCTTCCCCCCCATGGGATACCGCGATGCCAGCG
GCAAGCTGATCGGCTTCGACATCGACGCCGCCGAAGAAGTGGGCAAGCGCCTGGGCATCAAGATCGAGTGGCAGCCCACC
GCCTGGGACGGGGTCATCCACTCCCTCAACTCCAAAAAATTCGATGCCATCTGGAACGGCATGACTATCACCGATGAGCG
GGCCAAGCAGGTAGCCTTCACCAAGCCCTACATCATGGACGGCCAGATCGCCGTGGTGAAGTTCTCCGAGAAGCGCTTCA
AGAAGATCGCCGACCTGAAGAACGTGAAAATAGGCGCCCAGAAGGGCTCCTCGGCCCTCAACGCCGTGAAGAAGCTCCCC
ACCGCTCCGGCCGAGCTCAAGGAGTACGAGGACAACCCCAAGGCGCTGCTGGATCTTGAAGCGGGCCGCATCGACGTGGT
GGTGATCGACAACGTGACCGGCCGCGACTTCATCGCCAAGCGTCCGGGCCAGTTCAAGGTGGTCCCCGGCTTCATCAGCA
AGGAGCCCTTCGGCGTCGCCTTCCGCAAGGAAGACAAGGAACTGCGTGAGAAGGTGCAGAAGACCCTGGACAAGATGGTG
AAGGACGGCTCCCTGGCGAAGATCTCCCGCAAGTGGTTTGCAGAAGACATCACCAACCCCAAGAAGTGGTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: amino acid ABC transporter periplasmic amino acid-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:
NA

Sequences:

>Translated_263_residues
MKKLVLLMVSALLVAFAATAFAADGSWNRVKSAGKLVIGLDDAFPPMGYRDASGKLIGFDIDAAEEVGKRLGIKIEWQPT
AWDGVIHSLNSKKFDAIWNGMTITDERAKQVAFTKPYIMDGQIAVVKFSEKRFKKIADLKNVKIGAQKGSSALNAVKKLP
TAPAELKEYEDNPKALLDLEAGRIDVVVIDNVTGRDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELREKVQKTLDKMV
KDGSLAKISRKWFAEDITNPKKW
>Mature_263_residues
MKKLVLLMVSALLVAFAATAFAADGSWNRVKSAGKLVIGLDDAFPPMGYRDASGKLIGFDIDAAEEVGKRLGIKIEWQPT
AWDGVIHSLNSKKFDAIWNGMTITDERAKQVAFTKPYIMDGQIAVVKFSEKRFKKIADLKNVKIGAQKGSSALNAVKKLP
TAPAELKEYEDNPKALLDLEAGRIDVVVIDNVTGRDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELREKVQKTLDKMV
KDGSLAKISRKWFAEDITNPKKW

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=256, Percent_Identity=34.765625, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787085, Length=262, Percent_Identity=32.824427480916, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787031, Length=262, Percent_Identity=30.9160305343511, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787088, Length=261, Percent_Identity=29.5019157088123, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=33.0434782608696, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1788649, Length=262, Percent_Identity=29.7709923664122, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1786876, Length=245, Percent_Identity=23.6734693877551, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29155; Mature: 29155

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVLLMVSALLVAFAATAFAADGSWNRVKSAGKLVIGLDDAFPPMGYRDASGKLIGFD
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEE
IDAAEEVGKRLGIKIEWQPTAWDGVIHSLNSKKFDAIWNGMTITDERAKQVAFTKPYIMD
CCHHHHHHHHCCEEEEECCCHHHHHHHHCCCCHHHHHHCCCEECHHHHHHEECCCCEEEC
GQIAVVKFSEKRFKKIADLKNVKIGAQKGSSALNAVKKLPTAPAELKEYEDNPKALLDLE
CCEEEEEECHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEC
AGRIDVVVIDNVTGRDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELREKVQKTLDKMV
CCEEEEEEEECCCCCHHHHCCCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
KDGSLAKISRKWFAEDITNPKKW
CCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKLVLLMVSALLVAFAATAFAADGSWNRVKSAGKLVIGLDDAFPPMGYRDASGKLIGFD
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEE
IDAAEEVGKRLGIKIEWQPTAWDGVIHSLNSKKFDAIWNGMTITDERAKQVAFTKPYIMD
CCHHHHHHHHCCEEEEECCCHHHHHHHHCCCCHHHHHHCCCEECHHHHHHEECCCCEEEC
GQIAVVKFSEKRFKKIADLKNVKIGAQKGSSALNAVKKLPTAPAELKEYEDNPKALLDLE
CCEEEEEECHHHHHHHHHHHCCEECCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEC
AGRIDVVVIDNVTGRDFIAKRPGQFKVVPGFISKEPFGVAFRKEDKELREKVQKTLDKMV
CCEEEEEEEECCCCCHHHHCCCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
KDGSLAKISRKWFAEDITNPKKW
CCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]