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The map label for this gene is hupD [H]

Identifier: 308513279

GI number: 308513279

Start: 134385

End: 134855

Strand: Reverse

Name: hupD [H]

Synonym: NA

Alternate gene names: 308513279

Gene position: 134855-134385 (Counterclockwise)

Preceding gene: 39995232

Following gene: 39995230

Centisome position: 3.54

GC content: 65.61

Gene sequence:

>471_bases
CTGAGCATCCTGGTTCTCGGCATAGGAAACCTCATCATGTCCGATGACGGCGCCGGCGTGCGGGCGGTGGAACTGATCCG
GGAACTCCATCCCTTGCCTGCCGGGGTGACGCTCCTGGACGGCGGCACCCTTGGCCTCGACCTGCTTCCCCGGTTCGATG
GAGTCGACCGGCTGCTGGTAGTGGATGCCATCGACACGGGCGCGCCGGCGGGCACCCTGGTGCGGCTCGAGGGAGAGGAT
ATTCCGACAGCGCTCCGCACCAAGGTTTCCCCCCACCAGATGGGACTCCAGGATCTTCTTGCCGTGGCCGATCTCCAGGG
AAACCTTCCTGGGGAGATGGTCCTTTGGGGAATCCAGTACTGTTCCGTGGAACCCGGGACTGACCTGTCGGCGCCGGTAT
CGCGGGCGCTCCCCCTGCTGGTGGACCAGGTGCTGGCCGAACTGGCGGCATGGGGCATCCATCCCGTTTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:
NA

Sequences:

>Translated_156_residues
MSILVLGIGNLIMSDDGAGVRAVELIRELHPLPAGVTLLDGGTLGLDLLPRFDGVDRLLVVDAIDTGAPAGTLVRLEGED
IPTALRTKVSPHQMGLQDLLAVADLQGNLPGEMVLWGIQYCSVEPGTDLSAPVSRALPLLVDQVLAELAAWGIHPV
>Mature_155_residues
SILVLGIGNLIMSDDGAGVRAVELIRELHPLPAGVTLLDGGTLGLDLLPRFDGVDRLLVVDAIDTGAPAGTLVRLEGEDI
PTALRTKVSPHQMGLQDLLAVADLQGNLPGEMVLWGIQYCSVEPGTDLSAPVSRALPLLVDQVLAELAAWGIHPV

Specific function: Not known. Could be involved in the processing of hydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

Organism=Escherichia coli, GI1789367, Length=157, Percent_Identity=38.2165605095541, Blast_Score=106, Evalue=9e-25,
Organism=Escherichia coli, GI1787209, Length=155, Percent_Identity=41.2903225806452, Blast_Score=97, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004419
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 16324; Mature: 16193

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILVLGIGNLIMSDDGAGVRAVELIRELHPLPAGVTLLDGGTLGLDLLPRFDGVDRLLV
CEEEEEECCCEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE
VDAIDTGAPAGTLVRLEGEDIPTALRTKVSPHQMGLQDLLAVADLQGNLPGEMVLWGIQY
EEECCCCCCCCEEEEECCCCCCHHHHCCCCHHHHCHHHHHHHHHHCCCCCCCEEEEEEEE
CSVEPGTDLSAPVSRALPLLVDQVLAELAAWGIHPV
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SILVLGIGNLIMSDDGAGVRAVELIRELHPLPAGVTLLDGGTLGLDLLPRFDGVDRLLV
EEEEEECCCEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE
VDAIDTGAPAGTLVRLEGEDIPTALRTKVSPHQMGLQDLLAVADLQGNLPGEMVLWGIQY
EEECCCCCCCCEEEEECCCCCCHHHHCCCCHHHHCHHHHHHHHHHCCCCCCCEEEEEEEE
CSVEPGTDLSAPVSRALPLLVDQVLAELAAWGIHPV
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]