| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is nuoG [C]
Identifier: 57235003
GI number: 57235003
Start: 143111
End: 144832
Strand: Direct
Name: nuoG [C]
Synonym: DET0147
Alternate gene names: 57235003
Gene position: 143111-144832 (Clockwise)
Preceding gene: 57235004
Following gene: 57235002
Centisome position: 9.74
GC content: 53.19
Gene sequence:
>1722_bases ATGGTTACGCTAAATATTGACAACAAGCAGATAAGCGTACCTGAAGGTACGACTATTATGCAGGCCGCCAAGCAGGCCAA TATCAATATCCCCCACCTGTGTTATTTTGAAGGCCTGAAAAGTTACAGCGGCTGCCGGGTATGTGTGGTGGAAATAGAGG GTGAACCCCGTCTGGCTACGTCCTGCTCACGCAAGGTAGCCGAAGGCATGAAGGTTAATACCCATTCCGCCAGAGTACGC CGCGCCCGCCGCACCATACTTGAAATCCTGCTGGCCAATCACCCGCAGGACTGTTTTAACTGTGAGCGCAACCAGAACTG TGATTTGCTGCGTCTGGCGTTTGAATGCGGAGTTAAAAAGCTGCGCTTTGAAGAAAGCGAAAAGCGGGTGCTGCCTATAG ACAGTACCAGCCCCAGTATTATCCGTGACCCCAATAAATGTATTGCCTGCGGCCGGTGTGTCCGCGTCTGCCACGATATA CAAACAGTCAATGCCATCGGTTTTATAAATAAAGGCCCGGATACCATGGTGGCAACCTCCATGGACAGGGGTATGGGCAA TGTTGCCTGTGCCAACTGCGGCCAGTGCATACTGGTCTGCCCGGTGGGTGCTATCAAGGAACGCTCGGCGGTGGATGCTG TCTGGGCGGCTATAGCAGACCCCACTAAACACGTGGTTGTTCAGGAAGCTCCTTCGGTCAGGGTTTCTCTGGGCGAAGAG CTGGGCTTGCCGGCAGGTACGCTGGTTGCCAAAAAGATGTATGCCGCTTTAAGGCGTCTGGGTTTTGACGCCGTATTTGA TACCAACTTTACCGCTGACCTGACCATTATGGAAGAGGGTTCGGAACTGGTGGAACGGGTTAAGGACGGCGGGGTGCTTC CCCAGATAACCTCCTGCTGCCCCGGCTGGGTCAAGTTTATGGAGCATTATTATCCTGAACTTGCGCCCAACGTTTCCTCC GCCAAGTCCCCCCAGCAAATGTTCGGGGCGGTCTGCAAGACCTATTATGCCGAAAAATCCGGCATAGACCCCAAGGATAT TATCAATGTTTCGGTCATGCCCTGTACGGCCAAGAAATTTGAGTGCCAGCGTCCCGAAATGAATGACAGCGGCTTTAAAG ACGTGGATTATGTCTTGACTACCCGTGAGCTGGCCCGGATGATAAAAGAAGCCGGACTGGATTTTGCTTCACTGGACGAA GAGCCTGCCGAAGACTTGCTGGGTCTTTATACCGGTGCCGCCACTATCTTCGGGGCTACCGGCGGTGTTATGGAAGCGGC TATCCGCAGTGCCTACACCCTGATAACCGGGCGCGAACTGGAAAACCTGGATATAGAACCGGTGCGCGGTCTGGAAGGCA TTAAGACCGCCAGCGTTAATATTGACGGGTTAGAGGTTAAAGTAGCGGTGGCTCACGGGCTGGGAAATGCCCGTCACCTG CTGGATGAGATAAAAGAGGGTGTTTCGCCCTACCACTTTATAGAAATCATGGCCTGTCCCGGCGGTTGTGTCGGCGGCGG CGGCCAGCCAATACGCTTTGATTCCACTCTCAAGAAAAAGCGCGGCGAAGCCCTTTACGAAGAAGACAGAAACATGGCCA AGAGGTGTTCCCACCACAACCCGTCAGTAGAGAAGATATATAAAGACTATCTGGAGAAGCCGCTGGGCAAGCGTTCTCAC AAACTGCTGCATACCGAATATACCAGTCGCCCGGTAGTTTAA
Upstream 100 bases:
>100_bases CTTCCTGCGGTCTGGGACAGGTAGCCTTAAATGTGGCTGCCAGTGCCATTCGCAACTTCAAGGGTGAATTCTTGGCGCAG GTGCGTAAGGAGGAAGGCGT
Downstream 100 bases:
>100_bases GGGCAAGTAATAAAAACAATACGCGGGAGGAACAAAATAGATGTTCAATATCCAGAGTATCAGCCTTAGGAAAGAGCTTG TTATTGCTTTTTTAGTTATG
Product: [Fe] hydrogenase, large subunit HymC, putative
Products: NA
Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MVTLNIDNKQISVPEGTTIMQAAKQANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLATSCSRKVAEGMKVNTHSARVR RARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKKLRFEESEKRVLPIDSTSPSIIRDPNKCIACGRCVRVCHDI QTVNAIGFINKGPDTMVATSMDRGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPTKHVVVQEAPSVRVSLGEE LGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLTIMEEGSELVERVKDGGVLPQITSCCPGWVKFMEHYYPELAPNVSS AKSPQQMFGAVCKTYYAEKSGIDPKDIINVSVMPCTAKKFECQRPEMNDSGFKDVDYVLTTRELARMIKEAGLDFASLDE EPAEDLLGLYTGAATIFGATGGVMEAAIRSAYTLITGRELENLDIEPVRGLEGIKTASVNIDGLEVKVAVAHGLGNARHL LDEIKEGVSPYHFIEIMACPGGCVGGGGQPIRFDSTLKKKRGEALYEEDRNMAKRCSHHNPSVEKIYKDYLEKPLGKRSH KLLHTEYTSRPVV
Sequences:
>Translated_573_residues MVTLNIDNKQISVPEGTTIMQAAKQANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLATSCSRKVAEGMKVNTHSARVR RARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKKLRFEESEKRVLPIDSTSPSIIRDPNKCIACGRCVRVCHDI QTVNAIGFINKGPDTMVATSMDRGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPTKHVVVQEAPSVRVSLGEE LGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLTIMEEGSELVERVKDGGVLPQITSCCPGWVKFMEHYYPELAPNVSS AKSPQQMFGAVCKTYYAEKSGIDPKDIINVSVMPCTAKKFECQRPEMNDSGFKDVDYVLTTRELARMIKEAGLDFASLDE EPAEDLLGLYTGAATIFGATGGVMEAAIRSAYTLITGRELENLDIEPVRGLEGIKTASVNIDGLEVKVAVAHGLGNARHL LDEIKEGVSPYHFIEIMACPGGCVGGGGQPIRFDSTLKKKRGEALYEEDRNMAKRCSHHNPSVEKIYKDYLEKPLGKRSH KLLHTEYTSRPVV >Mature_573_residues MVTLNIDNKQISVPEGTTIMQAAKQANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLATSCSRKVAEGMKVNTHSARVR RARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKKLRFEESEKRVLPIDSTSPSIIRDPNKCIACGRCVRVCHDI QTVNAIGFINKGPDTMVATSMDRGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPTKHVVVQEAPSVRVSLGEE LGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLTIMEEGSELVERVKDGGVLPQITSCCPGWVKFMEHYYPELAPNVSS AKSPQQMFGAVCKTYYAEKSGIDPKDIINVSVMPCTAKKFECQRPEMNDSGFKDVDYVLTTRELARMIKEAGLDFASLDE EPAEDLLGLYTGAATIFGATGGVMEAAIRSAYTLITGRELENLDIEPVRGLEGIKTASVNIDGLEVKVAVAHGLGNARHL LDEIKEGVSPYHFIEIMACPGGCVGGGGQPIRFDSTLKKKRGEALYEEDRNMAKRCSHHNPSVEKIYKDYLEKPLGKRSH KLLHTEYTSRPVV
Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat
COG id: COG4624
COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI11968051, Length=399, Percent_Identity=30.0751879699248, Blast_Score=189, Evalue=8e-48, Organism=Homo sapiens, GI6912524, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI84452151, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI134284357, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI14165461, Length=414, Percent_Identity=28.2608695652174, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI33519475, Length=209, Percent_Identity=33.0143540669856, Blast_Score=134, Evalue=3e-31, Organism=Escherichia coli, GI145693161, Length=216, Percent_Identity=26.3888888888889, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32566231, Length=248, Percent_Identity=31.8548387096774, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17565758, Length=248, Percent_Identity=31.8548387096774, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI193209088, Length=243, Percent_Identity=31.2757201646091, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71995015, Length=403, Percent_Identity=29.7766749379653, Blast_Score=126, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324089, Length=391, Percent_Identity=27.3657289002558, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI116007464, Length=343, Percent_Identity=29.7376093294461, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI116007468, Length=343, Percent_Identity=29.7376093294461, Blast_Score=149, Evalue=7e-36, Organism=Drosophila melanogaster, GI116007470, Length=343, Percent_Identity=29.7376093294461, Blast_Score=149, Evalue=8e-36, Organism=Drosophila melanogaster, GI116007466, Length=343, Percent_Identity=29.7376093294461, Blast_Score=149, Evalue=8e-36, Organism=Drosophila melanogaster, GI24640559, Length=206, Percent_Identity=33.495145631068, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24640557, Length=206, Percent_Identity=33.495145631068, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI116007462, Length=297, Percent_Identity=29.96632996633, Blast_Score=126, Evalue=4e-29,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012675 - InterPro: IPR009016 - InterPro: IPR004108 - InterPro: IPR003149 - InterPro: IPR013352 - InterPro: IPR001041 [H]
Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]
EC number: =1.12.7.2 [H]
Molecular weight: Translated: 62798; Mature: 62798
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS51085 2FE2S_FER_2 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLNIDNKQISVPEGTTIMQAAKQANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLAT CEEEEECCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHH SCSRKVAEGMKVNTHSARVRRARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCHHH LRFEESEKRVLPIDSTSPSIIRDPNKCIACGRCVRVCHDIQTVNAIGFINKGPDTMVATS HCCCCCCCEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEH MDRGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPTKHVVVQEAPSVRVSLGEE HHCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCHH LGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLTIMEEGSELVERVKDGGVLPQITSCC HCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHCC PGWVKFMEHYYPELAPNVSSAKSPQQMFGAVCKTYYAEKSGIDPKDIINVSVMPCTAKKF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCCC ECQRPEMNDSGFKDVDYVLTTRELARMIKEAGLDFASLDEEPAEDLLGLYTGAATIFGAT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCC GGVMEAAIRSAYTLITGRELENLDIEPVRGLEGIKTASVNIDGLEVKVAVAHGLGNARHL CHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHHHH LDEIKEGVSPYHFIEIMACPGGCVGGGGQPIRFDSTLKKKRGEALYEEDRNMAKRCSHHN HHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHHHHCCCC PSVEKIYKDYLEKPLGKRSHKLLHTEYTSRPVV CCHHHHHHHHHHCCCCHHHHHEEEECCCCCCCC >Mature Secondary Structure MVTLNIDNKQISVPEGTTIMQAAKQANINIPHLCYFEGLKSYSGCRVCVVEIEGEPRLAT CEEEEECCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHH SCSRKVAEGMKVNTHSARVRRARRTILEILLANHPQDCFNCERNQNCDLLRLAFECGVKK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCHHH LRFEESEKRVLPIDSTSPSIIRDPNKCIACGRCVRVCHDIQTVNAIGFINKGPDTMVATS HCCCCCCCEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEH MDRGMGNVACANCGQCILVCPVGAIKERSAVDAVWAAIADPTKHVVVQEAPSVRVSLGEE HHCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCHH LGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLTIMEEGSELVERVKDGGVLPQITSCC HCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHCC PGWVKFMEHYYPELAPNVSSAKSPQQMFGAVCKTYYAEKSGIDPKDIINVSVMPCTAKKF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCCC ECQRPEMNDSGFKDVDYVLTTRELARMIKEAGLDFASLDEEPAEDLLGLYTGAATIFGAT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCC GGVMEAAIRSAYTLITGRELENLDIEPVRGLEGIKTASVNIDGLEVKVAVAHGLGNARHL CHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHHHH LDEIKEGVSPYHFIEIMACPGGCVGGGGQPIRFDSTLKKKRGEALYEEDRNMAKRCSHHN HHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHHHHCCCC PSVEKIYKDYLEKPLGKRSHKLLHTEYTSRPVV CCHHHHHHHHHHCCCCHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1911757; 9836629; 10529166 [H]