| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234990
Identifier: 57234990
GI number: 57234990
Start: 148436
End: 148987
Strand: Direct
Name: 57234990
Synonym: DET0153
Alternate gene names: NA
Gene position: 148436-148987 (Clockwise)
Preceding gene: 57235002
Following gene: 57234987
Centisome position: 10.1
GC content: 47.1
Gene sequence:
>552_bases ATGGCGGTAGCTGGTTTTATTTGTGAAAAAACAGCTGTTAAGTTAAAATTAGCTGATATGAAGAAGTTCCCCAAACGTAC ATATTCAAATCCCGCCCAGTTTCTCTCTGACATAGGTTTTATCCTGAAAAACCGCCGTAAATTAAAGGAATCCCGCTTAA GCGGATTTCCCAGTCCGGCTTTTCGGGAACGGCTGATGCTGGCCGTAACCGGGGTTAATGAATGCCGCTTTTGCACTTAT GCCCATACCAAAATGGCTTTGGAGAGCGGCATTTCCCAGCCGGAAGTAAAAGCCCTGCTTGACGGTGATTTCGGCAACTG CCCTTCGGGTGAACTAAATGCAGTCCTGTATGCCCAGCACTGGGCGGATACTGCCGCCAAACCCTCCGCAGAAATGCAAA GCAAACTTGAGGCAGATTACGGGGCTGAAAAAGCAGGTTTTATCCACCTGTATCTGCGTATGATACGCATAGGTAATTTA AGCGGCAATACGGCTGATAAATTTCTGTACTATCTCACCTTTGGCAAAATAGGGCTTAACCGCCAGCCGTAA
Upstream 100 bases:
>100_bases TGAAGGACTTAGCATACCCTAATTCTTTGAAAAATACCAGTTTAGGCCGCCTCTGGTGTGCGGCGATTTATGAGTGAAAC GCCTCTTGAGAGGCAACCTG
Downstream 100 bases:
>100_bases GTACGTTGAATTTAGATTTTCTATAAGATATAATCGGCCTGAGTTCTTTGGGTGGTTAGCTCAGTGGTTAGAGCACCTGC TTCACACGCAGGGGGTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain Protein; Alkylhydroperoxidase-Like Protein; Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAVAGFICEKTAVKLKLADMKKFPKRTYSNPAQFLSDIGFILKNRRKLKESRLSGFPSPAFRERLMLAVTGVNECRFCTY AHTKMALESGISQPEVKALLDGDFGNCPSGELNAVLYAQHWADTAAKPSAEMQSKLEADYGAEKAGFIHLYLRMIRIGNL SGNTADKFLYYLTFGKIGLNRQP
Sequences:
>Translated_183_residues MAVAGFICEKTAVKLKLADMKKFPKRTYSNPAQFLSDIGFILKNRRKLKESRLSGFPSPAFRERLMLAVTGVNECRFCTY AHTKMALESGISQPEVKALLDGDFGNCPSGELNAVLYAQHWADTAAKPSAEMQSKLEADYGAEKAGFIHLYLRMIRIGNL SGNTADKFLYYLTFGKIGLNRQP >Mature_182_residues AVAGFICEKTAVKLKLADMKKFPKRTYSNPAQFLSDIGFILKNRRKLKESRLSGFPSPAFRERLMLAVTGVNECRFCTYA HTKMALESGISQPEVKALLDGDFGNCPSGELNAVLYAQHWADTAAKPSAEMQSKLEADYGAEKAGFIHLYLRMIRIGNLS GNTADKFLYYLTFGKIGLNRQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20367; Mature: 20236
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAGFICEKTAVKLKLADMKKFPKRTYSNPAQFLSDIGFILKNRRKLKESRLSGFPSPA CCCCHHHHHHHHHEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH FRERLMLAVTGVNECRFCTYAHTKMALESGISQPEVKALLDGDFGNCPSGELNAVLYAQH HHHHHHHHEECCCCCEEEHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCEEEEEHH WADTAAKPSAEMQSKLEADYGAEKAGFIHLYLRMIRIGNLSGNTADKFLYYLTFGKIGLN HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEHEEECCCCCC RQP CCC >Mature Secondary Structure AVAGFICEKTAVKLKLADMKKFPKRTYSNPAQFLSDIGFILKNRRKLKESRLSGFPSPA CCCHHHHHHHHHEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH FRERLMLAVTGVNECRFCTYAHTKMALESGISQPEVKALLDGDFGNCPSGELNAVLYAQH HHHHHHHHEECCCCCEEEHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCEEEEEHH WADTAAKPSAEMQSKLEADYGAEKAGFIHLYLRMIRIGNLSGNTADKFLYYLTFGKIGLN HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEHEEECCCCCC RQP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA