| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
Click here to switch to the map view.
The map label for this gene is 57234827
Identifier: 57234827
GI number: 57234827
Start: 364790
End: 365560
Strand: Direct
Name: 57234827
Synonym: DET0383
Alternate gene names: NA
Gene position: 364790-365560 (Clockwise)
Preceding gene: 57234828
Following gene: 57234817
Centisome position: 24.82
GC content: 51.49
Gene sequence:
>771_bases ATGAGCAAATTTGTAGACAGGCTTAAAAATGTTTCCAAAGGCTATGTGCGTCCCATGGGCTTTAACGCGGTTGCCTCTGC TCCCCCGCCCAAAATGCTGCTGGCAGCCGAGCTGGATATTGAAAACCTGACGGATAAAGAAGCATTTGGCGGGGCAGACG TGGTGCTTGTCTCTGCCAGTAAAGCCAGTGCCAAAAAGCTGAAAGAAGCGGCTGATTTGCTGGGAGAGACTGTTTGGGGT GTTATGCTGGGTGATAAAGCAGCCGATGCCGCAAAAATGGCCAAGGCCGGGGCAGATTTTGTGGTCTTCAGCCCGGATGC CGAAGTATCACCCCTGACCGCTCTTGAAAAAACCGGCAAGATAATAATTCTTGAAACCAATCTGACTGATTTCATGATAA GGGCGGCGGACTGTTTGTCCGTAGGGGCGGTTATCGTGGGTGAGCAGGCAGATACGGCTACTCTTAGCTGGCGGAAGATT ATGCTCTACCAGCGTTTTGCGGATATATTGTCAAAACCCTTTCTGGTAAGGGTAAGTTCAAATATCACGCTTTCGGAGCT TCAGTCACTCTGGGCTTTGGGTATAGACGGGGTACTGGTAAGCGGGAGCGCAGGTTTGAAAGAACTGCACACACTGATAG ACAAGGCGGAGTGGACTCCTAAACGCAAACGCGGGCACATGAGTGCCATTGTGCCGTCTCTGAAAATGCCTGCGTCCGAA TCAGTTGCCCCTGAAGAGCCGGAAGAACCTGACGAAGGTGACGAGGAGTAG
Upstream 100 bases:
>100_bases CAGCGTGGCTCAGAGGTAGAGCAGCGGTTTCGTAAACCGCCGGTCGGAGGTTCGAATCCTCTCGCTGGCTCCATTTATTT ATGACGAGGTATAAGACTAA
Downstream 100 bases:
>100_bases GCGCTTCTTTTCAGATTTGAATTTCAGCCAATAAAAAAAGCCGGTTTAAACCGGCTTTTTGTTTTATAGTTTAGACCAAA TACTTTATTGGCACTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSKFVDRLKNVSKGYVRPMGFNAVASAPPPKMLLAAELDIENLTDKEAFGGADVVLVSASKASAKKLKEAADLLGETVWG VMLGDKAADAAKMAKAGADFVVFSPDAEVSPLTALEKTGKIIILETNLTDFMIRAADCLSVGAVIVGEQADTATLSWRKI MLYQRFADILSKPFLVRVSSNITLSELQSLWALGIDGVLVSGSAGLKELHTLIDKAEWTPKRKRGHMSAIVPSLKMPASE SVAPEEPEEPDEGDEE
Sequences:
>Translated_256_residues MSKFVDRLKNVSKGYVRPMGFNAVASAPPPKMLLAAELDIENLTDKEAFGGADVVLVSASKASAKKLKEAADLLGETVWG VMLGDKAADAAKMAKAGADFVVFSPDAEVSPLTALEKTGKIIILETNLTDFMIRAADCLSVGAVIVGEQADTATLSWRKI MLYQRFADILSKPFLVRVSSNITLSELQSLWALGIDGVLVSGSAGLKELHTLIDKAEWTPKRKRGHMSAIVPSLKMPASE SVAPEEPEEPDEGDEE >Mature_255_residues SKFVDRLKNVSKGYVRPMGFNAVASAPPPKMLLAAELDIENLTDKEAFGGADVVLVSASKASAKKLKEAADLLGETVWGV MLGDKAADAAKMAKAGADFVVFSPDAEVSPLTALEKTGKIIILETNLTDFMIRAADCLSVGAVIVGEQADTATLSWRKIM LYQRFADILSKPFLVRVSSNITLSELQSLWALGIDGVLVSGSAGLKELHTLIDKAEWTPKRKRGHMSAIVPSLKMPASES VAPEEPEEPDEGDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27387; Mature: 27256
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFVDRLKNVSKGYVRPMGFNAVASAPPPKMLLAAELDIENLTDKEAFGGADVVLVSAS CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCHHHCCCCCEEEEECC KASAKKLKEAADLLGETVWGVMLGDKAADAAKMAKAGADFVVFSPDAEVSPLTALEKTGK HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCC IIILETNLTDFMIRAADCLSVGAVIVGEQADTATLSWRKIMLYQRFADILSKPFLVRVSS EEEEECCHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC NITLSELQSLWALGIDGVLVSGSAGLKELHTLIDKAEWTPKRKRGHMSAIVPSLKMPASE CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCC SVAPEEPEEPDEGDEE CCCCCCCCCCCCCCCC >Mature Secondary Structure SKFVDRLKNVSKGYVRPMGFNAVASAPPPKMLLAAELDIENLTDKEAFGGADVVLVSAS CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCHHHCCCCCEEEEECC KASAKKLKEAADLLGETVWGVMLGDKAADAAKMAKAGADFVVFSPDAEVSPLTALEKTGK HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCC IIILETNLTDFMIRAADCLSVGAVIVGEQADTATLSWRKIMLYQRFADILSKPFLVRVSS EEEEECCHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC NITLSELQSLWALGIDGVLVSGSAGLKELHTLIDKAEWTPKRKRGHMSAIVPSLKMPASE CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCC SVAPEEPEEPDEGDEE CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA