| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57234828
Identifier: 57234828
GI number: 57234828
Start: 364234
End: 364611
Strand: Direct
Name: 57234828
Synonym: DET0381
Alternate gene names: NA
Gene position: 364234-364611 (Clockwise)
Preceding gene: 57234858
Following gene: 57234827
Centisome position: 24.78
GC content: 52.91
Gene sequence:
>378_bases ATGGGTAAATGTGATACCGCACCCTTAGCTGACGATGTCTGGAGTGTGATGGACAGCCAGATTACCCTTGATTTGGAAAA GCTGCCGGGGCTGTCTTTAAAGGGCGGGGCTGGTTATATGGCGGGCAAAGGCCTTGCCAAGCCGGTGCTGGTGGTACGCG GTCAGGATAATAACCTTTATGCTTATGAAAATGCCTGCCCCCATGGCGGACGCAAAATTGACCCCGTACAGGGCGAAGCC AGACTCCGCTGCTGCAGTGTAAACCACTCTACCTTTGATTATAACGGCAAGGTTCTTTCCGGGCCTGCCCAGCATAAGCA TGAACTAAGGCGTTTGCTGACCAGCCAGGCTGACGGGAAACTCCTTATCAGCCTTTAA
Upstream 100 bases:
>100_bases CTGTTGATCCGGCCTGATCTTTGTGCTATACTTTTGTAGTCAAACGGGAAGTTTTTAAAGTAAAAACAGGGAGGCTTTGG TGAATATTTTTAAAGCTATC
Downstream 100 bases:
>100_bases TATCCGGGTTTAAAAAACTCTGCGGAACTGCTATCGGTAGTGACGGAAATATCCGTTATGCTATACTGTTGCCTGCGCCA GCGTGGCTCAGAGGTAGAGC
Product: Rieske family iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Rieske Domain Protein; Rieske Iron-Sulfur Domain Protein; Rieske Iron-Sulfur Domain-Containing Protein
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MGKCDTAPLADDVWSVMDSQITLDLEKLPGLSLKGGAGYMAGKGLAKPVLVVRGQDNNLYAYENACPHGGRKIDPVQGEA RLRCCSVNHSTFDYNGKVLSGPAQHKHELRRLLTSQADGKLLISL
Sequences:
>Translated_125_residues MGKCDTAPLADDVWSVMDSQITLDLEKLPGLSLKGGAGYMAGKGLAKPVLVVRGQDNNLYAYENACPHGGRKIDPVQGEA RLRCCSVNHSTFDYNGKVLSGPAQHKHELRRLLTSQADGKLLISL >Mature_124_residues GKCDTAPLADDVWSVMDSQITLDLEKLPGLSLKGGAGYMAGKGLAKPVLVVRGQDNNLYAYENACPHGGRKIDPVQGEAR LRCCSVNHSTFDYNGKVLSGPAQHKHELRRLLTSQADGKLLISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13463; Mature: 13331
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKCDTAPLADDVWSVMDSQITLDLEKLPGLSLKGGAGYMAGKGLAKPVLVVRGQDNNLY CCCCCCCCCHHHHHHHHCCEEEEEHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCCCEE AYENACPHGGRKIDPVQGEARLRCCSVNHSTFDYNGKVLSGPAQHKHELRRLLTSQADGK EECCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCEEECCCHHHHHHHHHHHHCCCCCE LLISL EEEEC >Mature Secondary Structure GKCDTAPLADDVWSVMDSQITLDLEKLPGLSLKGGAGYMAGKGLAKPVLVVRGQDNNLY CCCCCCCCHHHHHHHHCCEEEEEHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCCCEE AYENACPHGGRKIDPVQGEARLRCCSVNHSTFDYNGKVLSGPAQHKHELRRLLTSQADGK EECCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCEEECCCHHHHHHHHHHHHCCCCCE LLISL EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA