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The map label for this gene is leuD [H]

Identifier: 57234732

GI number: 57234732

Start: 426333

End: 426836

Strand: Direct

Name: leuD [H]

Synonym: DET0449

Alternate gene names: 57234732

Gene position: 426333-426836 (Clockwise)

Preceding gene: 57234733

Following gene: 57234731

Centisome position: 29.01

GC content: 50.0

Gene sequence:

>504_bases
ATGCTTAAGGGCAAAGCTTTTAAGTTTGGTGATAGCATATCCACTGACCATATTGCACCCGGCCGTCTGGTGCACCTGCG
GAGCAATCTGCCGGAACTGGCCAAGCACGTGCTGGAAGATGCAGACCCCACTTTTGCCCAAAGGGTAAAACCGGGTGATT
TTGTGGTAGCCGGCAACAACTTCGGCTTGGGTTCTTCGCGTGAACACGCCCCGCTGATTATTAAAATGTCCGGGGTGAGT
GCGGTACTGGCAAAGTCGGTAGCCCGCATTTTCTTCCGCAACGCCATAAATCTGGGTCTGCCCGTACTTATATGTGATAC
CGATAAAATTGCCGAAGGGGATGAACTGGAAGTAGACCTTACGGGCGGCAAAATATATGACCGTACTAACGGGGCAGAGC
TGACATTTGGCAAGATACCCCCCGCCATGCTGAAGATACTTGATGAGGGAGGTGTCATGCCCTATATAAAGAAATACGGT
GATTTCAAGCTTAACGAAGTTTAA

Upstream 100 bases:

>100_bases
GGATGGGCAACCCCGAAGGGTTTATTTATCTGGCAAGTGCGGCAACGGCTGCGGCATCAGCCATCAAGGGTGAAATTTCA
GACCCCAGAGAGGTAATGTA

Downstream 100 bases:

>100_bases
GGAGTTTTATTCTGATGTCTCATAACGTAACCCTTATACCCGGTGACGGGATTGGCCCTGAAATATCTGAGGCAACCCGC
CGGGTACTGGAAGCTACCGG

Product: 3-isopropylmalate dehydratase small subunit

Products: NA

Alternate protein names: Alpha-IPM isomerase 2; IPMI 2; Isopropylmalate isomerase 2 [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPELAKHVLEDADPTFAQRVKPGDFVVAGNNFGLGSSREHAPLIIKMSGVS
AVLAKSVARIFFRNAINLGLPVLICDTDKIAEGDELEVDLTGGKIYDRTNGAELTFGKIPPAMLKILDEGGVMPYIKKYG
DFKLNEV

Sequences:

>Translated_167_residues
MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPELAKHVLEDADPTFAQRVKPGDFVVAGNNFGLGSSREHAPLIIKMSGVS
AVLAKSVARIFFRNAINLGLPVLICDTDKIAEGDELEVDLTGGKIYDRTNGAELTFGKIPPAMLKILDEGGVMPYIKKYG
DFKLNEV
>Mature_167_residues
MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPELAKHVLEDADPTFAQRVKPGDFVVAGNNFGLGSSREHAPLIIKMSGVS
AVLAKSVARIFFRNAINLGLPVLICDTDKIAEGDELEVDLTGGKIYDRTNGAELTFGKIPPAMLKILDEGGVMPYIKKYG
DFKLNEV

Specific function: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate [H]

COG id: COG0066

COG function: function code E; 3-isopropylmalate dehydratase small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leuD family. LeuD type 2 subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320440, Length=102, Percent_Identity=40.1960784313725, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012305
- InterPro:   IPR015937
- InterPro:   IPR015928
- InterPro:   IPR000573
- InterPro:   IPR011827 [H]

Pfam domain/function: PF00694 Aconitase_C [H]

EC number: =4.2.1.33 [H]

Molecular weight: Translated: 18093; Mature: 18093

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPELAKHVLEDADPTFAQRVKPGDFVVAGNN
CCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCEEEECCC
FGLGSSREHAPLIIKMSGVSAVLAKSVARIFFRNAINLGLPVLICDTDKIAEGDELEVDL
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE
TGGKIYDRTNGAELTFGKIPPAMLKILDEGGVMPYIKKYGDFKLNEV
ECCEEEECCCCCEEEECCCCHHHHHHHHCCCCCHHHHHCCCEEECCC
>Mature Secondary Structure
MLKGKAFKFGDSISTDHIAPGRLVHLRSNLPELAKHVLEDADPTFAQRVKPGDFVVAGNN
CCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCEEEECCC
FGLGSSREHAPLIIKMSGVSAVLAKSVARIFFRNAINLGLPVLICDTDKIAEGDELEVDL
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE
TGGKIYDRTNGAELTFGKIPPAMLKILDEGGVMPYIKKYGDFKLNEV
ECCEEEECCCCCEEEECCCCHHHHHHHHCCCCCHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]