| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is fur [H]
Identifier: 57234543
GI number: 57234543
Start: 584917
End: 585348
Strand: Direct
Name: fur [H]
Synonym: DET0630
Alternate gene names: 57234543
Gene position: 584917-585348 (Clockwise)
Preceding gene: 57234544
Following gene: 57234535
Centisome position: 39.8
GC content: 51.85
Gene sequence:
>432_bases GTGCCAACTATTCAGAGCCGTATCCGCCAGAATAAATACAAGATTACGCCCCAGCGGCAGGCTGTTTTAAAGGTATTGTC TGCTGCTACCCAGCCGCTAAGCCCGTCAGAAGTGCATGAACTGGTGCAGGCGGCTAAACCTTCAACCGGTATGGCAACTG TCTACCGTTCTCTCCAGCTTTTGTCCGAACTGGGGCTTGTTTGCGAGCTGCATACCGCCGGTAATTGCCACCGCTATCTG CTTAGGCGTATTGATTCCCATCACCACCATTTGATTTGTTCCGGTTGCGGTCAGGTTATTCACGTGGAGGGGTGCGGGCT TAAAGAGATTACGGAAAATTTGTCCCGGCAGACCGGGTTTGCTATAGATGCCCATTTGCTGGAGTTTATCGGGCGTTGCC GGAATTGTCAGAAAGAGGCGGGGAAAGTATGA
Upstream 100 bases:
>100_bases GGAGGCTTTTTATTTTAAGGGATAATTAACCCCCGTGATTCTTGCTATTTGAAAAAGCCGAAGCTATAATTGAGAAAACC TATCAATTAGAAGGATTACA
Downstream 100 bases:
>100_bases AATTAAGGACATTATTTTTGAGTTTGGCTTTAGGCGTTACCCTGCTTAGCAGTTTACTGCTGGCGGGTTGTCAGGAAGAT TCATCTTCTGCTGCCAAGCT
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPTIQSRIRQNKYKITPQRQAVLKVLSAATQPLSPSEVHELVQAAKPSTGMATVYRSLQLLSELGLVCELHTAGNCHRYL LRRIDSHHHHLICSGCGQVIHVEGCGLKEITENLSRQTGFAIDAHLLEFIGRCRNCQKEAGKV
Sequences:
>Translated_143_residues MPTIQSRIRQNKYKITPQRQAVLKVLSAATQPLSPSEVHELVQAAKPSTGMATVYRSLQLLSELGLVCELHTAGNCHRYL LRRIDSHHHHLICSGCGQVIHVEGCGLKEITENLSRQTGFAIDAHLLEFIGRCRNCQKEAGKV >Mature_142_residues PTIQSRIRQNKYKITPQRQAVLKVLSAATQPLSPSEVHELVQAAKPSTGMATVYRSLQLLSELGLVCELHTAGNCHRYLL RRIDSHHHHLICSGCGQVIHVEGCGLKEITENLSRQTGFAIDAHLLEFIGRCRNCQKEAGKV
Specific function: Iron uptake repressor. Acts on the transcription of ferri-siderophore uptake genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=131, Percent_Identity=30.5343511450382, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15891; Mature: 15759
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIQSRIRQNKYKITPQRQAVLKVLSAATQPLSPSEVHELVQAAKPSTGMATVYRSLQL CCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH LSELGLVCELHTAGNCHRYLLRRIDSHHHHLICSGCGQVIHVEGCGLKEITENLSRQTGF HHHHHHHEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHCCC AIDAHLLEFIGRCRNCQKEAGKV HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTIQSRIRQNKYKITPQRQAVLKVLSAATQPLSPSEVHELVQAAKPSTGMATVYRSLQL CCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH LSELGLVCELHTAGNCHRYLLRRIDSHHHHLICSGCGQVIHVEGCGLKEITENLSRQTGF HHHHHHHEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHCCC AIDAHLLEFIGRCRNCQKEAGKV HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9701813 [H]