| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is porB [H]
Identifier: 57234508
GI number: 57234508
Start: 670346
End: 671287
Strand: Direct
Name: porB [H]
Synonym: DET0727
Alternate gene names: 57234508
Gene position: 670346-671287 (Clockwise)
Preceding gene: 57234515
Following gene: 57234507
Centisome position: 45.61
GC content: 49.26
Gene sequence:
>942_bases ATGCAGAACTATTCAGTATTTGTTCCCAAGCTACTGCCCAAGCGTGAGTTATTTGCCCCCGGTCATCGCGGGTGTATAGG TTGCGGTGAGGCTCTGGCAGTTCGTCTGGCTACCAAGGCTATGGATGAAAACACCATAATAGTGAATGCCACCGGCTGCA TGGAAATTATCGCTTCCCAGTACCCGTATACCTCATGGCGTTTACCCTGGATACATACCCTGTTTGAAAATACAGCCGCA GTTGCCTCTGGCGTTGAGTCAGCTATAAAGGTGCTTAAACGGAAAAAGAGGATAGAGGACAGGGATATAAAGATTGTAGC CATTGGCGGTGACGGTGCAACTGTGGATATTGGTCTTCAGGCACTTTCAGGCGCTATGGAACGCGGGCATAACTTCACTT ATATCTGTTTTGACAATGAAGCTTATATGAATACCGGTATCCAGCGTTCCTCGGCTACCCCTTTCGGTGCGTCCACCACT ACCTCACCGGCCGGTAAAGTAGGCAAAGGCCAGTTCTCATGGAAAAAAGATATGCCGGCCATAGCTGTGGCCCATAATAT TCCTTATGTGGCTACCTGTTGCCCTAGCTATCCTTTTGATATGATTGAAAAAGTAGGTAAGGCCCTGGCGGCTGACGGTC CGGCCTATATACACTGTTTATCTGTTTGTCCCACCGGCTGGCGCTGTGCCACTGAAGATACCGTGAAGATAGGGCGTTTG GCAGTTGAAACCGGTGTTTTCCCGCTGTATGAGGTTGTTAACGGCCAGTACAAAATGAGCATGGAAACGCCTGAGCTTAA GCCTTTGCGTGAGTACACCAGTCTTCAGCGGCGGTTCCGCCACCTGACAGAAGAATCTCTGGACCTTATTCAGGAAAGAG TTCAGCTGGAATACAATAAGATTGCAGAGAGGGCGGCATGTGCACCGAAACTAGAGAAATAG
Upstream 100 bases:
>100_bases ATATAACTGTTGCCAATTTTGAAGATATCATGAAAAGAGGTCTGGAGATTGCTGAAAAAGGCAGTCCCAACGAATACGAA ATATATGGAGTGAGGGCGTG
Downstream 100 bases:
>100_bases TAGCGCCAAAAGTTAAAAATATTCTGGATAAATATGCCAAAGACAAGGGTATGCTGGTAGCTATACTGCAGGATATCCAG ACTGAGTTCAACTATCTTCC
Product: pyruvic-ferredoxin oxidoreductase, beta subunit
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MQNYSVFVPKLLPKRELFAPGHRGCIGCGEALAVRLATKAMDENTIIVNATGCMEIIASQYPYTSWRLPWIHTLFENTAA VASGVESAIKVLKRKKRIEDRDIKIVAIGGDGATVDIGLQALSGAMERGHNFTYICFDNEAYMNTGIQRSSATPFGASTT TSPAGKVGKGQFSWKKDMPAIAVAHNIPYVATCCPSYPFDMIEKVGKALAADGPAYIHCLSVCPTGWRCATEDTVKIGRL AVETGVFPLYEVVNGQYKMSMETPELKPLREYTSLQRRFRHLTEESLDLIQERVQLEYNKIAERAACAPKLEK
Sequences:
>Translated_313_residues MQNYSVFVPKLLPKRELFAPGHRGCIGCGEALAVRLATKAMDENTIIVNATGCMEIIASQYPYTSWRLPWIHTLFENTAA VASGVESAIKVLKRKKRIEDRDIKIVAIGGDGATVDIGLQALSGAMERGHNFTYICFDNEAYMNTGIQRSSATPFGASTT TSPAGKVGKGQFSWKKDMPAIAVAHNIPYVATCCPSYPFDMIEKVGKALAADGPAYIHCLSVCPTGWRCATEDTVKIGRL AVETGVFPLYEVVNGQYKMSMETPELKPLREYTSLQRRFRHLTEESLDLIQERVQLEYNKIAERAACAPKLEK >Mature_313_residues MQNYSVFVPKLLPKRELFAPGHRGCIGCGEALAVRLATKAMDENTIIVNATGCMEIIASQYPYTSWRLPWIHTLFENTAA VASGVESAIKVLKRKKRIEDRDIKIVAIGGDGATVDIGLQALSGAMERGHNFTYICFDNEAYMNTGIQRSSATPFGASTT TSPAGKVGKGQFSWKKDMPAIAVAHNIPYVATCCPSYPFDMIEKVGKALAADGPAYIHCLSVCPTGWRCATEDTVKIGRL AVETGVFPLYEVVNGQYKMSMETPELKPLREYTSLQRRFRHLTEESLDLIQERVQLEYNKIAERAACAPKLEK
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 34521; Mature: 34521
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNYSVFVPKLLPKRELFAPGHRGCIGCGEALAVRLATKAMDENTIIVNATGCMEIIASQ CCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHC YPYTSWRLPWIHTLFENTAAVASGVESAIKVLKRKKRIEDRDIKIVAIGGDGATVDIGLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHH ALSGAMERGHNFTYICFDNEAYMNTGIQRSSATPFGASTTTSPAGKVGKGQFSWKKDMPA HHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE IAVAHNIPYVATCCPSYPFDMIEKVGKALAADGPAYIHCLSVCPTGWRCATEDTVKIGRL EEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCEECCCCHHHHHHH AVETGVFPLYEVVNGQYKMSMETPELKPLREYTSLQRRFRHLTEESLDLIQERVQLEYNK HHHHCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAERAACAPKLEK HHHHHHCCCCCCC >Mature Secondary Structure MQNYSVFVPKLLPKRELFAPGHRGCIGCGEALAVRLATKAMDENTIIVNATGCMEIIASQ CCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHC YPYTSWRLPWIHTLFENTAAVASGVESAIKVLKRKKRIEDRDIKIVAIGGDGATVDIGLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHH ALSGAMERGHNFTYICFDNEAYMNTGIQRSSATPFGASTTTSPAGKVGKGQFSWKKDMPA HHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE IAVAHNIPYVATCCPSYPFDMIEKVGKALAADGPAYIHCLSVCPTGWRCATEDTVKIGRL EEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCEECCCCHHHHHHH AVETGVFPLYEVVNGQYKMSMETPELKPLREYTSLQRRFRHLTEESLDLIQERVQLEYNK HHHHCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAERAACAPKLEK HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]