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The map label for this gene is sufC [C]

Identifier: 57234452

GI number: 57234452

Start: 745089

End: 745844

Strand: Direct

Name: sufC [C]

Synonym: DET0815

Alternate gene names: 57234452

Gene position: 745089-745844 (Clockwise)

Preceding gene: 57234453

Following gene: 57234451

Centisome position: 50.7

GC content: 49.34

Gene sequence:

>756_bases
ATGGATTTAGAAATTTTGCTTGAGGTAAAAGACCTCCACGTTGAGGTAGATGGCCGTGAGATACTCCACGGAGTTGACCT
GGTACTGCCTGCCGGAGAAACCCATGTCATTTTCGGGCCTAACGGCAGCGGCAAAACTACTTTGCTGATGACTCTGATGG
GCTTTCCCCGGTACAAGATAACTCAGGGGCAGCTTATATTTAATGGCAAAGATATTACCCATGTCCCCATTGATGAGCGT
GCCCGTTTAGGCATAGGCATAAGTTTTCAGCGCCCGCCAGTAGTCCGCGGGGTAAAACTGAGGGAAATGGTCAGGAGTTC
GCTTCGGACTAAAGAAGACTCAGGCTTGATTGATGAGCTTGCCAAAAAAGCCCACATGACAGATTTTCTGGAAAGAGACG
TAAACCACGGCTTTTCCGGGGGTGAAATCAAACGTTCCGAACTGCTGCAGTTACTGGCACAAGGGCCGGATATGGTCCTG
CTTGATGAACCTGAATCCGGGGTTGATTTGGAAAATATTGCCCTTATCGGCAGCCTTATAAATGACCTGCTGGAGAAAAA
ACACCCTATCCGCGAACGCAAACGGGGTGGTCTGGTAATAACCCACACCGGGCATATCCTGGATTATGTAAACGCCCGTA
CCGGTTATGTGCTCTGCCACGGACGCATAAATTGCACCGGTGACCCGCGGGATATGCTGGAAACTATAAAGCAGAACGGT
TATCAGGAGTGTGTAGAATGTCCCCGAAAGATCTAA

Upstream 100 bases:

>100_bases
GGTAAAATAGTCATGCCGCCAGTTGGCGTGCAAATTGCATATCCGCCGCTTTACTGGTAACATTTAACATATACTAAGCA
TAAATTCAGGGGTATTTAAA

Downstream 100 bases:

>100_bases
GGCCCAATCTGGCTGATAAAGCCGGTGCTGCTGTAAATAAAAAACCCGCCATCGGTGATGATATTTTATTAGAAAAATAT
ACCGATAATACCGATGACCA

Product: FeS assembly ATPase SufC, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDLEILLEVKDLHVEVDGREILHGVDLVLPAGETHVIFGPNGSGKTTLLMTLMGFPRYKITQGQLIFNGKDITHVPIDER
ARLGIGISFQRPPVVRGVKLREMVRSSLRTKEDSGLIDELAKKAHMTDFLERDVNHGFSGGEIKRSELLQLLAQGPDMVL
LDEPESGVDLENIALIGSLINDLLEKKHPIRERKRGGLVITHTGHILDYVNARTGYVLCHGRINCTGDPRDMLETIKQNG
YQECVECPRKI

Sequences:

>Translated_251_residues
MDLEILLEVKDLHVEVDGREILHGVDLVLPAGETHVIFGPNGSGKTTLLMTLMGFPRYKITQGQLIFNGKDITHVPIDER
ARLGIGISFQRPPVVRGVKLREMVRSSLRTKEDSGLIDELAKKAHMTDFLERDVNHGFSGGEIKRSELLQLLAQGPDMVL
LDEPESGVDLENIALIGSLINDLLEKKHPIRERKRGGLVITHTGHILDYVNARTGYVLCHGRINCTGDPRDMLETIKQNG
YQECVECPRKI
>Mature_251_residues
MDLEILLEVKDLHVEVDGREILHGVDLVLPAGETHVIFGPNGSGKTTLLMTLMGFPRYKITQGQLIFNGKDITHVPIDER
ARLGIGISFQRPPVVRGVKLREMVRSSLRTKEDSGLIDELAKKAHMTDFLERDVNHGFSGGEIKRSELLQLLAQGPDMVL
LDEPESGVDLENIALIGSLINDLLEKKHPIRERKRGGLVITHTGHILDYVNARTGYVLCHGRINCTGDPRDMLETIKQNG
YQECVECPRKI

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI171184400, Length=255, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787972, Length=254, Percent_Identity=35.4330708661417, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1789593, Length=235, Percent_Identity=29.7872340425532, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI87081791, Length=172, Percent_Identity=30.8139534883721, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787029, Length=258, Percent_Identity=27.5193798449612, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787370, Length=228, Percent_Identity=28.0701754385965, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788225, Length=261, Percent_Identity=27.2030651340996, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787758, Length=244, Percent_Identity=27.4590163934426, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=226, Percent_Identity=28.7610619469027, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87081709, Length=240, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787089, Length=231, Percent_Identity=26.8398268398268, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=25.531914893617, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789864, Length=197, Percent_Identity=25.8883248730964, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786345, Length=191, Percent_Identity=27.2251308900524, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082268, Length=220, Percent_Identity=30.9090909090909, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786563, Length=169, Percent_Identity=28.9940828402367, Blast_Score=61, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=248, Percent_Identity=26.2096774193548, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24659289, Length=209, Percent_Identity=25.8373205741627, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653245, Length=177, Percent_Identity=27.1186440677966, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28027; Mature: 28027

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLEILLEVKDLHVEVDGREILHGVDLVLPAGETHVIFGPNGSGKTTLLMTLMGFPRYKI
CCEEEEEEEEEEEEEECCHHHHCCEEEEEECCCEEEEECCCCCCCCEEEEEHHCCCCEEE
TQGQLIFNGKDITHVPIDERARLGIGISFQRPPVVRGVKLREMVRSSLRTKEDSGLIDEL
ECCEEEECCCCEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
AKKAHMTDFLERDVNHGFSGGEIKRSELLQLLAQGPDMVLLDEPESGVDLENIALIGSLI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
NDLLEKKHPIRERKRGGLVITHTGHILDYVNARTGYVLCHGRINCTGDPRDMLETIKQNG
HHHHHCCCCHHHHHCCCEEEEECCHHHHHHCCCCCEEEEECEEECCCCHHHHHHHHHHCC
YQECVECPRKI
HHHHHHCCCCC
>Mature Secondary Structure
MDLEILLEVKDLHVEVDGREILHGVDLVLPAGETHVIFGPNGSGKTTLLMTLMGFPRYKI
CCEEEEEEEEEEEEEECCHHHHCCEEEEEECCCEEEEECCCCCCCCEEEEEHHCCCCEEE
TQGQLIFNGKDITHVPIDERARLGIGISFQRPPVVRGVKLREMVRSSLRTKEDSGLIDEL
ECCEEEECCCCEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
AKKAHMTDFLERDVNHGFSGGEIKRSELLQLLAQGPDMVLLDEPESGVDLENIALIGSLI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
NDLLEKKHPIRERKRGGLVITHTGHILDYVNARTGYVLCHGRINCTGDPRDMLETIKQNG
HHHHHCCCCHHHHHCCCEEEEECCHHHHHHCCCCCEEEEECEEECCCCHHHHHHHHHHCC
YQECVECPRKI
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]