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The map label for this gene is yfiN [H]

Identifier: 57234453

GI number: 57234453

Start: 744263

End: 744988

Strand: Direct

Name: yfiN [H]

Synonym: DET0814

Alternate gene names: 57234453

Gene position: 744263-744988 (Clockwise)

Preceding gene: 57234454

Following gene: 57234452

Centisome position: 50.64

GC content: 49.17

Gene sequence:

>726_bases
ATGAATAATATACTGGCTATTGCCCAGAGGCTTATCCGCCAGTTGCTCCATGACCGGCGGACTATGGCCCTTATTATAGT
AGTCCCGGTGGTGGTTATGGGGCTTATAGGGGTAAGTTTCCCGGATGCCACTGTACTTGATTATATTGCCCCGGCCATGC
TGGCCACTTTAGCCCTGTTTTTCAGCTTCCTGCTGACCGGCATTTCATTCCTTAGGGAGACATCTCAGGGGACTATGGAA
AGGCTTATGGCGGCACCTGTTTCCCGTCTGGACATAGTTGCCGGTTATCTGCTGGGGTTTTTCGTGTTTGCCCTGCTCCA
GACACTTATCATTGTTCTTTTTACTATCTACGTGCTGGGAGTCAACTTTCAGGGTGAACTCTGGCAGATTCTGCTCTTTC
AGGTGCTTATTATTACCGGGGCGGTTACACTGGGCATTTTCACCAGCAGTTTTGCCAAAAATGAATTTCAAATGGTTCAG
TTTATCCCTCTTATTATTGTCCCCCAGGTGTTTTTGTGCGGTGTTATCTGGCCGGTTTCCCAAATGCCGGAATGGCTTCA
GTACCTGTCAAATATACTGCCGCTGACCTATGGCGTGGACGGCATGCGGGAAATAATGCTTCAGGGGAAAAATCTGGCTG
AAGTAGGCTTTCAGTGCGGGGTTCTGATATTGTTTGCAGTTATTACCACCGCTTTGGCGGCACTCACCGTTCCCAAGCGC
CGCTAA

Upstream 100 bases:

>100_bases
GAAGGTACTCCGTCAGAATTAAAGGCGGCTACAGGCAATGCCGATGCCAGTTTGGAAGACGCCTTTTTATATTCCATCCG
CACAGGAGGTGCTCTCAGCC

Downstream 100 bases:

>100_bases
GGTAAAATAGTCATGCCGCCAGTTGGCGTGCAAATTGCATATCCGCCGCTTTACTGGTAACATTTAACATATACTAAGCA
TAAATTCAGGGGTATTTAAA

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNNILAIAQRLIRQLLHDRRTMALIIVVPVVVMGLIGVSFPDATVLDYIAPAMLATLALFFSFLLTGISFLRETSQGTME
RLMAAPVSRLDIVAGYLLGFFVFALLQTLIIVLFTIYVLGVNFQGELWQILLFQVLIITGAVTLGIFTSSFAKNEFQMVQ
FIPLIIVPQVFLCGVIWPVSQMPEWLQYLSNILPLTYGVDGMREIMLQGKNLAEVGFQCGVLILFAVITTALAALTVPKR
R

Sequences:

>Translated_241_residues
MNNILAIAQRLIRQLLHDRRTMALIIVVPVVVMGLIGVSFPDATVLDYIAPAMLATLALFFSFLLTGISFLRETSQGTME
RLMAAPVSRLDIVAGYLLGFFVFALLQTLIIVLFTIYVLGVNFQGELWQILLFQVLIITGAVTLGIFTSSFAKNEFQMVQ
FIPLIIVPQVFLCGVIWPVSQMPEWLQYLSNILPLTYGVDGMREIMLQGKNLAEVGFQCGVLILFAVITTALAALTVPKR
R
>Mature_241_residues
MNNILAIAQRLIRQLLHDRRTMALIIVVPVVVMGLIGVSFPDATVLDYIAPAMLATLALFFSFLLTGISFLRETSQGTME
RLMAAPVSRLDIVAGYLLGFFVFALLQTLIIVLFTIYVLGVNFQGELWQILLFQVLIITGAVTLGIFTSSFAKNEFQMVQ
FIPLIIVPQVFLCGVIWPVSQMPEWLQYLSNILPLTYGVDGMREIMLQGKNLAEVGFQCGVLILFAVITTALAALTVPKR
R

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=201, Percent_Identity=26.865671641791, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1787011, Length=171, Percent_Identity=23.9766081871345, Blast_Score=70, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24650855, Length=168, Percent_Identity=29.1666666666667, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24650853, Length=168, Percent_Identity=29.1666666666667, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24582014, Length=213, Percent_Identity=24.4131455399061, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24582012, Length=213, Percent_Identity=24.4131455399061, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI85725262, Length=173, Percent_Identity=26.0115606936416, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI85725260, Length=173, Percent_Identity=26.0115606936416, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 26744; Mature: 26744

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNILAIAQRLIRQLLHDRRTMALIIVVPVVVMGLIGVSFPDATVLDYIAPAMLATLALF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FSFLLTGISFLRETSQGTMERLMAAPVSRLDIVAGYLLGFFVFALLQTLIIVLFTIYVLG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNFQGELWQILLFQVLIITGAVTLGIFTSSFAKNEFQMVQFIPLIIVPQVFLCGVIWPVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMPEWLQYLSNILPLTYGVDGMREIMLQGKNLAEVGFQCGVLILFAVITTALAALTVPKR
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
R
C
>Mature Secondary Structure
MNNILAIAQRLIRQLLHDRRTMALIIVVPVVVMGLIGVSFPDATVLDYIAPAMLATLALF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FSFLLTGISFLRETSQGTMERLMAAPVSRLDIVAGYLLGFFVFALLQTLIIVLFTIYVLG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNFQGELWQILLFQVLIITGAVTLGIFTSSFAKNEFQMVQFIPLIIVPQVFLCGVIWPVS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMPEWLQYLSNILPLTYGVDGMREIMLQGKNLAEVGFQCGVLILFAVITTALAALTVPKR
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]