| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is maF [C]
Identifier: 57234090
GI number: 57234090
Start: 1024118
End: 1024792
Strand: Direct
Name: maF [C]
Synonym: DET1120
Alternate gene names: 57234090
Gene position: 1024118-1024792 (Clockwise)
Preceding gene: 57234092
Following gene: 57234060
Centisome position: 69.68
GC content: 52.3
Gene sequence:
>675_bases ATGCCTGACTGCCAAAATACCAATCTGCCTGAAATAATACTGGCCTCAGCCTCACCCCGCCGGCAACAGATACTAAGGGA AATGGGCTTCACGTTTTCAGTTTGCCCTTCCCAGGCTGAGTTACACCCTGACGGTTCGGTTGCACCCGCCAAATTTGCCA CTTTAAATGCCGAAACCAAAGCCAGAGACATTGCCCGGAATACCAGACAGGGGCTTATCATAGCTGCAGATACAGTAGTG GTGGATACACTAGGCATACTGGGCAAGCCTGCTTCCCCGGAAGAAGCCCTTAACTACCTGCTCAGGCTGGGCGGTAAAAG CCATACGGTAATAAGCGGCATTTGCTTAATAAATACCCAAAACGGCCAGGTACGCTCCGGCACCTGTCAGAGCAGCCTCC ATATGCGCCCTTTTACTCCGGCGGAAGCCCAAAGATATGTGGAAAGCGGCCTGCCCATGGACAAAGCCGGTGCCTACGGC ATACAGGACAGGGAATTTGAACCGGTGGAAAAGATAGAAGGCTGCTATCTGAATGTAGTCGGCCTGCCGGCCTGTACTTT AGTGCGGCTGATGAAAGAAATGGGCTTTTGCCCGGAACTGCATGATAACTGGCAGCCCGAAGGAGATTGCACCCTTTGCC GTATTTACCGCACCGGTATAAACCAGACCTGTTAA
Upstream 100 bases:
>100_bases TCATAGTGCTTGGCCGGAAATAAATCCCAAATAGGTTTTGATAATAAGACGCACTGCCTGATTGCAGATAAAAATATCCG GTACGGGAGCAAACAAAATC
Downstream 100 bases:
>100_bases AGGATAAATCTACAGCCAGTTAAGCTAAGTGCGCTACCGGTAGAGTAAAATTCAGCCGCTGCCGGCTGTTTCATATTTTT TAAGGCAGCTGCTGCAGATA
Product: septum formation protein MaF
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MPDCQNTNLPEIILASASPRRQQILREMGFTFSVCPSQAELHPDGSVAPAKFATLNAETKARDIARNTRQGLIIAADTVV VDTLGILGKPASPEEALNYLLRLGGKSHTVISGICLINTQNGQVRSGTCQSSLHMRPFTPAEAQRYVESGLPMDKAGAYG IQDREFEPVEKIEGCYLNVVGLPACTLVRLMKEMGFCPELHDNWQPEGDCTLCRIYRTGINQTC
Sequences:
>Translated_224_residues MPDCQNTNLPEIILASASPRRQQILREMGFTFSVCPSQAELHPDGSVAPAKFATLNAETKARDIARNTRQGLIIAADTVV VDTLGILGKPASPEEALNYLLRLGGKSHTVISGICLINTQNGQVRSGTCQSSLHMRPFTPAEAQRYVESGLPMDKAGAYG IQDREFEPVEKIEGCYLNVVGLPACTLVRLMKEMGFCPELHDNWQPEGDCTLCRIYRTGINQTC >Mature_223_residues PDCQNTNLPEIILASASPRRQQILREMGFTFSVCPSQAELHPDGSVAPAKFATLNAETKARDIARNTRQGLIIAADTVVV DTLGILGKPASPEEALNYLLRLGGKSHTVISGICLINTQNGQVRSGTCQSSLHMRPFTPAEAQRYVESGLPMDKAGAYGI QDREFEPVEKIEGCYLNVVGLPACTLVRLMKEMGFCPELHDNWQPEGDCTLCRIYRTGINQTC
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=205, Percent_Identity=32.6829268292683, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI291045183, Length=201, Percent_Identity=31.8407960199005, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI291045181, Length=159, Percent_Identity=30.188679245283, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI310133124, Length=137, Percent_Identity=31.3868613138686, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1789646, Length=196, Percent_Identity=31.6326530612245, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI87081830, Length=191, Percent_Identity=29.3193717277487, Blast_Score=86, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193202443, Length=182, Percent_Identity=32.967032967033, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI78706856, Length=194, Percent_Identity=34.5360824742268, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1120_DEHE1 (Q3Z7G4)
Other databases:
- EMBL: CP000027 - RefSeq: YP_181835.1 - ProteinModelPortal: Q3Z7G4 - SMR: Q3Z7G4 - STRING: Q3Z7G4 - GeneID: 3229556 - GenomeReviews: CP000027_GR - KEGG: det:DET1120 - NMPDR: fig|243164.3.peg.1019 - TIGR: DET1120 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: VVGLPLC - PhylomeDB: Q3Z7G4 - ProtClustDB: CLSK837104 - BioCyc: DETH243164:DET_1120-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 24480; Mature: 24349
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: ACT_SITE 40-40
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDCQNTNLPEIILASASPRRQQILREMGFTFSVCPSQAELHPDGSVAPAKFATLNAETK CCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECCCHHH ARDIARNTRQGLIIAADTVVVDTLGILGKPASPEEALNYLLRLGGKSHTVISGICLINTQ HHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECC NGQVRSGTCQSSLHMRPFTPAEAQRYVESGLPMDKAGAYGIQDREFEPVEKIEGCYLNVV CCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEE GLPACTLVRLMKEMGFCPELHDNWQPEGDCTLCRIYRTGINQTC CCCHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEEEEHHCCCCCC >Mature Secondary Structure PDCQNTNLPEIILASASPRRQQILREMGFTFSVCPSQAELHPDGSVAPAKFATLNAETK CCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECCCHHH ARDIARNTRQGLIIAADTVVVDTLGILGKPASPEEALNYLLRLGGKSHTVISGICLINTQ HHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECC NGQVRSGTCQSSLHMRPFTPAEAQRYVESGLPMDKAGAYGIQDREFEPVEKIEGCYLNVV CCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEE GLPACTLVRLMKEMGFCPELHDNWQPEGDCTLCRIYRTGINQTC CCCHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA