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The map label for this gene is 57233875

Identifier: 57233875

GI number: 57233875

Start: 1237479

End: 1238483

Strand: Direct

Name: 57233875

Synonym: DET1368

Alternate gene names: NA

Gene position: 1237479-1238483 (Clockwise)

Preceding gene: 57233876

Following gene: 57233865

Centisome position: 84.2

GC content: 52.44

Gene sequence:

>1005_bases
TTGAACCGGGACACTTCCGAATATACTCCCAGATACCTTGAGCTTTATGAATCAGGGGAGCTAAAGCAGAGGCTTTTACG
TCTTGAGGAACGTATGGCGGAGTGTGACCTCTGTCCCCGGAAATGCGGGGTAAACCGCCTGATAAACGATACCGGCGGGT
ACTGCCACAGCGGAAACGCCCCCATAGTGGCAGCAGTCTGTGAGCATCTGGGGGAAGAACCGGCCATATCCGGGGATAAC
GGCTCCGGCACTGTTTTCTTTTCAAACTGCAACCTTAGGTGTGCCTTCTGCCAGAACCACCAGATAAGCCAGGATTATGA
AAACCAGCAGAAAAACCTGACAGACTGCCAGACTCTGGCCAGACAGATTGTAGACCTGCAAAATACCAAAGGGGTACACA
ATATTAACTTTGTTTCACCCTCTCACTTCGTCCCCCAAATGCTGCGCACCCTGATAGAGGCCATACCCATGGGGCTGAGA
GTGCCGGTAGTCTACAATACCAACGCCTATGACTCTCTGGAAACGCTGTATGAGCTGGACGGGGTGGTAGATATATACCT
GCCAGACCTCAAGTTTGCCAATAACGAATGGGCGCGCCAGATTTCCGGCTGCAAAGACTACGTCAGCCATGCCCGTGCCG
CCATACGGGAAATGTTCCGCCAGGTGGGACGGGTGCGTTACAACTCCGAAGGAATTGCCGAGAGGGGGCTTATTGTACGC
CACCTGATTTTGCCGGATGATTTAGCCGGCAGCAAAGAATCCCTCCGGTGGATAGCAGATTTATCAACCGAGATTACAGT
CAGCCTGATGGCCCAGTACTACCCCTGCCACCGGGCTTTGGATATGCCCCCGCTTGCCCGAACTATATCTGTGGCCGAAT
ACCGCACCGCCATAAATATGCTGGATATTTTGGGAATAGAAAACGGGTGGCTTCAGGAACCGGATGCCAAGGACTACTAT
ATCCCTGATTTCCAGCGCAACGGCCACCCGTTTATAAGTTACTAA

Upstream 100 bases:

>100_bases
CCGTTTATCATAAACGCTTTGGGCATGAAAACCGAAACTGAAACTGAATCCGTACGCAAAACTATTGAAAAAGCCCTGAA
ACTCCAGGGAAGGATTTAGC

Downstream 100 bases:

>100_bases
TTAAAGTTTTTGTGAAAACTAACCGTGGCGTTTGCGGTTGCAGAAGGCAAAGTGGATTTTCAGGCCGCTGACCTTATCCT
TTTTGTTTACCCCGGTTATA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNRDTSEYTPRYLELYESGELKQRLLRLEERMAECDLCPRKCGVNRLINDTGGYCHSGNAPIVAAVCEHLGEEPAISGDN
GSGTVFFSNCNLRCAFCQNHQISQDYENQQKNLTDCQTLARQIVDLQNTKGVHNINFVSPSHFVPQMLRTLIEAIPMGLR
VPVVYNTNAYDSLETLYELDGVVDIYLPDLKFANNEWARQISGCKDYVSHARAAIREMFRQVGRVRYNSEGIAERGLIVR
HLILPDDLAGSKESLRWIADLSTEITVSLMAQYYPCHRALDMPPLARTISVAEYRTAINMLDILGIENGWLQEPDAKDYY
IPDFQRNGHPFISY

Sequences:

>Translated_334_residues
MNRDTSEYTPRYLELYESGELKQRLLRLEERMAECDLCPRKCGVNRLINDTGGYCHSGNAPIVAAVCEHLGEEPAISGDN
GSGTVFFSNCNLRCAFCQNHQISQDYENQQKNLTDCQTLARQIVDLQNTKGVHNINFVSPSHFVPQMLRTLIEAIPMGLR
VPVVYNTNAYDSLETLYELDGVVDIYLPDLKFANNEWARQISGCKDYVSHARAAIREMFRQVGRVRYNSEGIAERGLIVR
HLILPDDLAGSKESLRWIADLSTEITVSLMAQYYPCHRALDMPPLARTISVAEYRTAINMLDILGIENGWLQEPDAKDYY
IPDFQRNGHPFISY
>Mature_334_residues
MNRDTSEYTPRYLELYESGELKQRLLRLEERMAECDLCPRKCGVNRLINDTGGYCHSGNAPIVAAVCEHLGEEPAISGDN
GSGTVFFSNCNLRCAFCQNHQISQDYENQQKNLTDCQTLARQIVDLQNTKGVHNINFVSPSHFVPQMLRTLIEAIPMGLR
VPVVYNTNAYDSLETLYELDGVVDIYLPDLKFANNEWARQISGCKDYVSHARAAIREMFRQVGRVRYNSEGIAERGLIVR
HLILPDDLAGSKESLRWIADLSTEITVSLMAQYYPCHRALDMPPLARTISVAEYRTAINMLDILGIENGWLQEPDAKDYY
IPDFQRNGHPFISY

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37964; Mature: 37964

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRDTSEYTPRYLELYESGELKQRLLRLEERMAECDLCPRKCGVNRLINDTGGYCHSGNA
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCEEECCCC
PIVAAVCEHLGEEPAISGDNGSGTVFFSNCNLRCAFCQNHQISQDYENQQKNLTDCQTLA
CHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHCCCHHHHHHH
RQIVDLQNTKGVHNINFVSPSHFVPQMLRTLIEAIPMGLRVPVVYNTNAYDSLETLYELD
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHC
GVVDIYLPDLKFANNEWARQISGCKDYVSHARAAIREMFRQVGRVRYNSEGIAERGLIVR
CEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCHHHH
HLILPDDLAGSKESLRWIADLSTEITVSLMAQYYPCHRALDMPPLARTISVAEYRTAINM
EEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHH
LDILGIENGWLQEPDAKDYYIPDFQRNGHPFISY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRDTSEYTPRYLELYESGELKQRLLRLEERMAECDLCPRKCGVNRLINDTGGYCHSGNA
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCEEECCCC
PIVAAVCEHLGEEPAISGDNGSGTVFFSNCNLRCAFCQNHQISQDYENQQKNLTDCQTLA
CHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHCCCHHHHHHH
RQIVDLQNTKGVHNINFVSPSHFVPQMLRTLIEAIPMGLRVPVVYNTNAYDSLETLYELD
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHC
GVVDIYLPDLKFANNEWARQISGCKDYVSHARAAIREMFRQVGRVRYNSEGIAERGLIVR
CEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCHHHH
HLILPDDLAGSKESLRWIADLSTEITVSLMAQYYPCHRALDMPPLARTISVAEYRTAINM
EEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHH
LDILGIENGWLQEPDAKDYYIPDFQRNGHPFISY
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]