Click here to switch to the map view.

The map label for this gene is hspR [H]

Identifier: 57233812

GI number: 57233812

Start: 1281311

End: 1281616

Strand: Direct

Name: hspR [H]

Synonym: DET1412

Alternate gene names: 57233812

Gene position: 1281311-1281616 (Clockwise)

Preceding gene: 57233813

Following gene: 57233811

Centisome position: 87.18

GC content: 45.42

Gene sequence:

>306_bases
ATGGAAAATGCAAACCAGCCCCGTTATGTAATCTCAGTAGCTGCCGAAATACTGGGTATGCAGACTTATACCCTGCGGTA
TTACGAAAGGGTGGGCATTATCAAGCCTTTCCGTTCGCAGGGCAGGATAAGATTATACTCGGAGCAGGATATTGAACGGC
TGAAACTGGCCAAAACCCTGCTGGATGATTTGGGTATAAATATGGCCGGGGTTGAAGTAATCTTAAACATGCGTAACCGC
ATTCAGGAGCTTATATCCGAAAACGAAGCCCTGAGGGAAGAAATACAATTACTCAGAGAGGAGTAA

Upstream 100 bases:

>100_bases
CAAAATCAACATTGTGCTGCCGGAAAAACTTACCGCCGCTGAAAGAGACCTTTTTGAAAAACTGCGCCAGCTTAGGCCGG
ACAGTTAAAGGGAGATATTT

Downstream 100 bases:

>100_bases
ACCCGTGAGACAGGAAAAATTTACCGAACAAGCCCAGGAAGCCCTCAGTGCTTCACAGATGCTGGTGCAGGAATACCAGC
ACAGCCAATGGGACGTTGAA

Product: HspR protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MENANQPRYVISVAAEILGMQTYTLRYYERVGIIKPFRSQGRIRLYSEQDIERLKLAKTLLDDLGINMAGVEVILNMRNR
IQELISENEALREEIQLLREE

Sequences:

>Translated_101_residues
MENANQPRYVISVAAEILGMQTYTLRYYERVGIIKPFRSQGRIRLYSEQDIERLKLAKTLLDDLGINMAGVEVILNMRNR
IQELISENEALREEIQLLREE
>Mature_101_residues
MENANQPRYVISVAAEILGMQTYTLRYYERVGIIKPFRSQGRIRLYSEQDIERLKLAKTLLDDLGINMAGVEVILNMRNR
IQELISENEALREEIQLLREE

Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 11855; Mature: 11855

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENANQPRYVISVAAEILGMQTYTLRYYERVGIIKPFRSQGRIRLYSEQDIERLKLAKTL
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHH
LDDLGINMAGVEVILNMRNRIQELISENEALREEIQLLREE
HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MENANQPRYVISVAAEILGMQTYTLRYYERVGIIKPFRSQGRIRLYSEQDIERLKLAKTL
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHH
LDDLGINMAGVEVILNMRNRIQELISENEALREEIQLLREE
HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8801421; 12000953 [H]