| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is purM [H]
Identifier: 57233808
GI number: 57233808
Start: 1286352
End: 1287374
Strand: Direct
Name: purM [H]
Synonym: DET1416
Alternate gene names: 57233808
Gene position: 1286352-1287374 (Clockwise)
Preceding gene: 57233809
Following gene: 57233807
Centisome position: 87.52
GC content: 50.64
Gene sequence:
>1023_bases TTGAGAGGTGGGCACATCAAAGATACATATGCCGGGGCAGGAGTAGATATAAATTCCGCCTCAAAATCAAAAGAACTCAT CAAGCAGTACGCCAAAGCCACTTTGGGCTCCCAGGTACTGGCCGGGCCGGGATTTTTCGGCGGAATGTACGAATTCAAAG GCTACAAAAACCCGGTGCTGGTTTCCAGTTGTGATGGAGTAGGCACCAAACTGAAACTGGCCGGGGTGCTGAATAAACAT GACACTATAGGCATTGACATTGTCAACCACTCTGTCAATGATATACTGACCTCCGGGGCTGAACCAATCTTTTTCCTTGA TTACATAGCCATGGGCAAACTTTCGCCTGAAAAAATAGCCGACATTGTCAAGGGACTGTCTACCGCCTGTCTAGAGGCGG GCTGCGCCCTTATCGGCGGAGAAACGGCCGAAATGCCCGGCCTTTACCACGGGGAAGATTATGATTTGGCCGGCTTTATC GTAGGGGTAGTTGAAAAGGAAAATATGCTTATCAACCGGGGTATCAAACCGGGAGATGTCATTTTGGGTCTGGCTTCAAA CGGACTCCACACCAACGGTTATTCGCTGGCACGCAAAGTTCTGGGCGAAAGCCGCGAAGCTCTGGATAAATATTATCCCG AACTGGGGCAAACCGCAGGCGAAGCCCTGCTGGTGCCTCACCGCAGTTATCTGAAAGAAATAAAGCCCAACCTCCCCCTC ATAAAAGGGCTGGCCCACATAACCGGCGGAGGCCTGACAGACAATGTCCCCAGGACACTGCCCGAAGATGTATCCGCCCG TTTTGAAACTAAAAACTGGGAAATACCGCCCCTCCTCCAGCTTATCCAGAAAACCGGGGGAATAGACCGCGAAGAGATGT TCCACGTGTTTAATATGGGTATAGGCATGGTGATTATAGCCGGCAGCGAAGAGGCCGCTCTGATAATGCAAAATCTGCCG GAAGCAAAAGTAATCGGGGAGATTGCAGCCCGCCAAAGCGGAGTGCAGGTAATAATTGAATAA
Upstream 100 bases:
>100_bases GGAGTTATTCCGGATTTAACACCGCCCGAAGTTTTATACCTTCGGCGGTGTTTTTTCTTTGCAGTTGATAGCTATTTCTG ATAATCTTAGTTACCACAAT
Downstream 100 bases:
>100_bases GCAGCCGGGATTCTTTCCAGAGGCAGCTTTTTCACAGACTATACGGGCATAGCTGCCAAGAGCAGCTTGCCGCAAATATA TTTATGCACCTGGTAAAAAT
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRGGHIKDTYAGAGVDINSASKSKELIKQYAKATLGSQVLAGPGFFGGMYEFKGYKNPVLVSSCDGVGTKLKLAGVLNKH DTIGIDIVNHSVNDILTSGAEPIFFLDYIAMGKLSPEKIADIVKGLSTACLEAGCALIGGETAEMPGLYHGEDYDLAGFI VGVVEKENMLINRGIKPGDVILGLASNGLHTNGYSLARKVLGESREALDKYYPELGQTAGEALLVPHRSYLKEIKPNLPL IKGLAHITGGGLTDNVPRTLPEDVSARFETKNWEIPPLLQLIQKTGGIDREEMFHVFNMGIGMVIIAGSEEAALIMQNLP EAKVIGEIAARQSGVQVIIE
Sequences:
>Translated_340_residues MRGGHIKDTYAGAGVDINSASKSKELIKQYAKATLGSQVLAGPGFFGGMYEFKGYKNPVLVSSCDGVGTKLKLAGVLNKH DTIGIDIVNHSVNDILTSGAEPIFFLDYIAMGKLSPEKIADIVKGLSTACLEAGCALIGGETAEMPGLYHGEDYDLAGFI VGVVEKENMLINRGIKPGDVILGLASNGLHTNGYSLARKVLGESREALDKYYPELGQTAGEALLVPHRSYLKEIKPNLPL IKGLAHITGGGLTDNVPRTLPEDVSARFETKNWEIPPLLQLIQKTGGIDREEMFHVFNMGIGMVIIAGSEEAALIMQNLP EAKVIGEIAARQSGVQVIIE >Mature_340_residues MRGGHIKDTYAGAGVDINSASKSKELIKQYAKATLGSQVLAGPGFFGGMYEFKGYKNPVLVSSCDGVGTKLKLAGVLNKH DTIGIDIVNHSVNDILTSGAEPIFFLDYIAMGKLSPEKIADIVKGLSTACLEAGCALIGGETAEMPGLYHGEDYDLAGFI VGVVEKENMLINRGIKPGDVILGLASNGLHTNGYSLARKVLGESREALDKYYPELGQTAGEALLVPHRSYLKEIKPNLPL IKGLAHITGGGLTDNVPRTLPEDVSARFETKNWEIPPLLQLIQKTGGIDREEMFHVFNMGIGMVIIAGSEEAALIMQNLP EAKVIGEIAARQSGVQVIIE
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=337, Percent_Identity=44.8071216617211, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI209869995, Length=337, Percent_Identity=44.8071216617211, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI209869993, Length=337, Percent_Identity=44.8071216617211, Blast_Score=276, Evalue=2e-74, Organism=Escherichia coli, GI1788845, Length=343, Percent_Identity=44.3148688046647, Blast_Score=279, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17567511, Length=323, Percent_Identity=38.6996904024768, Blast_Score=201, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6321203, Length=335, Percent_Identity=39.1044776119403, Blast_Score=251, Evalue=1e-67, Organism=Drosophila melanogaster, GI24582400, Length=296, Percent_Identity=38.5135135135135, Blast_Score=207, Evalue=9e-54,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 36287; Mature: 36287
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGGHIKDTYAGAGVDINSASKSKELIKQYAKATLGSQVLAGPGFFGGMYEFKGYKNPVL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHCCCCCCCEE VSSCDGVGTKLKLAGVLNKHDTIGIDIVNHSVNDILTSGAEPIFFLDYIAMGKLSPEKIA EECCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCEEHHHHHHHCCCCHHHHH DIVKGLSTACLEAGCALIGGETAEMPGLYHGEDYDLAGFIVGVVEKENMLINRGIKPGDV HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHEEEEECCCCCCEECCCCCCCE ILGLASNGLHTNGYSLARKVLGESREALDKYYPELGQTAGEALLVPHRSYLKEIKPNLPL EEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCHH IKGLAHITGGGLTDNVPRTLPEDVSARFETKNWEIPPLLQLIQKTGGIDREEMFHVFNMG HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCC IGMVIIAGSEEAALIMQNLPEAKVIGEIAARQSGVQVIIE CCEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MRGGHIKDTYAGAGVDINSASKSKELIKQYAKATLGSQVLAGPGFFGGMYEFKGYKNPVL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHCCCCCCCEE VSSCDGVGTKLKLAGVLNKHDTIGIDIVNHSVNDILTSGAEPIFFLDYIAMGKLSPEKIA EECCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCEEHHHHHHHCCCCHHHHH DIVKGLSTACLEAGCALIGGETAEMPGLYHGEDYDLAGFIVGVVEKENMLINRGIKPGDV HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHEEEEECCCCCCEECCCCCCCE ILGLASNGLHTNGYSLARKVLGESREALDKYYPELGQTAGEALLVPHRSYLKEIKPNLPL EEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCHH IKGLAHITGGGLTDNVPRTLPEDVSARFETKNWEIPPLLQLIQKTGGIDREEMFHVFNMG HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCC IGMVIIAGSEEAALIMQNLPEAKVIGEIAARQSGVQVIIE CCEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA