| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is betI [C]
Identifier: 57233764
GI number: 57233764
Start: 1307196
End: 1307573
Strand: Direct
Name: betI [C]
Synonym: DET1436
Alternate gene names: 57233764
Gene position: 1307196-1307573 (Clockwise)
Preceding gene: 57233765
Following gene: 57233763
Centisome position: 88.94
GC content: 50.0
Gene sequence:
>378_bases ATGCCCGAAACAGCTAAACCGGAAACCCGCAGAATACAGGCTGAAAAACGCCGCCAGGAAATACTGGACGCTGCCCTAAA GGTATTCGCTGAACAAGGCTATCAGGGGGCAACTATCAGCCAGATATCCGAAGCAGCCGGAACATCTCTGGAGCTGCTTT ACCATTACTTCTCCAACAAAAAAGCCCTGATGGAGGCGGTAATAGCCGAACACAGTTTCCTGCCCCTGTTAAAAAACATA ATAGCCAAACAGGGCAAACAGAGTATCGAATCTGTCCTCAGCCAGCTCTGTCTTCAGTTTTACCGCCTGCTGGAATCAAA AAAAGAGCTGGTGGCTATCTTTCTGCGGGAAGGAACCAGCAATCCGGCCGTCAGCTAG
Upstream 100 bases:
>100_bases AACCCCGAAATATCTTTCAGGATGTATTGACAATGCCCGCTTTTAAACTATAATTAGTATATATTGAATGAATATTCAAT GAACTTTAAAGGAAACGCCC
Downstream 100 bases:
>100_bases GTCTGGTTCAGCATGATACGCCAGGGGGTAACTTCGCTCATCTCCCTCCTTGACCAGGGCGTCAAGCAAGGGGTTTTAAA AGAACACCGTCTGGACGTCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcription Regulator Tetr Family
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MPETAKPETRRIQAEKRRQEILDAALKVFAEQGYQGATISQISEAAGTSLELLYHYFSNKKALMEAVIAEHSFLPLLKNI IAKQGKQSIESVLSQLCLQFYRLLESKKELVAIFLREGTSNPAVS
Sequences:
>Translated_125_residues MPETAKPETRRIQAEKRRQEILDAALKVFAEQGYQGATISQISEAAGTSLELLYHYFSNKKALMEAVIAEHSFLPLLKNI IAKQGKQSIESVLSQLCLQFYRLLESKKELVAIFLREGTSNPAVS >Mature_124_residues PETAKPETRRIQAEKRRQEILDAALKVFAEQGYQGATISQISEAAGTSLELLYHYFSNKKALMEAVIAEHSFLPLLKNII AKQGKQSIESVLSQLCLQFYRLLESKKELVAIFLREGTSNPAVS
Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14011; Mature: 13880
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETAKPETRRIQAEKRRQEILDAALKVFAEQGYQGATISQISEAAGTSLELLYHYFSNK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCH KALMEAVIAEHSFLPLLKNIIAKQGKQSIESVLSQLCLQFYRLLESKKELVAIFLREGTS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPAVS CCCCC >Mature Secondary Structure PETAKPETRRIQAEKRRQEILDAALKVFAEQGYQGATISQISEAAGTSLELLYHYFSNK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCH KALMEAVIAEHSFLPLLKNIIAKQGKQSIESVLSQLCLQFYRLLESKKELVAIFLREGTS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPAVS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA