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The map label for this gene is 57233731

Identifier: 57233731

GI number: 57233731

Start: 1316911

End: 1317450

Strand: Direct

Name: 57233731

Synonym: DET1459

Alternate gene names: NA

Gene position: 1316911-1317450 (Clockwise)

Preceding gene: 57233732

Following gene: 57233730

Centisome position: 89.6

GC content: 50.93

Gene sequence:

>540_bases
ATGGAGATTCAGATTACCACCAAGAATTGCCGTCTGGACAACCGCACCCGCAGTTATATCCAACGCAAAATGGGACGGAT
AACCCGGATACTGCCCCAGATTTCCGAATTCAGGATAGAGCTTGACGAGGAACAAACCCGCTCACAGGCAGACCATTTTA
TCCTTAAAGCCACGCTCAATACCGGTACAGACGTACTTTACGCTGAAGAACGGGCAGAAAACCTGCTGACCGCCGCTGAC
CGGGCGGTAGAGGTGCTTAACCAGCAGATTGACCATGCCAAAGGCAAGATGGAAGTAAAAGCACGCAATCGTGAAAGTAT
ACGCCTCAGTCAGCCGGATACATTTTCATCTTCCAAAGAGCCTCTAATCCGAAGACGCAAACAAGAGGCCAAACCCATGA
CCGTAGAAGAAGCGGTCAACCAGATGAACCTATCAGGTGAAGAATACCTGCTCTTTTTAGGCCCGGACACCAAACGGGTA
AACCTGCTCCGCCGCTTTGCTGACGGCAAGTTTGAGCTGGTTGAACCCGTACCGGAGTAG

Upstream 100 bases:

>100_bases
GGCGCTACCCTGAATGCCTGCGCCGCCACTCTTAAAGAGGCTGGTGCCCTCAGCGTATGGGGACTGACCATAGCCAGAGA
AAGATAGAGGAGTGTAGAGT

Downstream 100 bases:

>100_bases
TTTTTGATGTCCGGCCTTCCTCCTCAACATACCCAGGAGACCGCAGGCTCAAAAATCAGGGGTGGATAACCGCTTTTGAG
TAGAGTTACACCAAACGGCC

Product: ribosomal subunit interface protein, putative

Products: NA

Alternate protein names: SSU Ribosomal P; Ribosome-Associated Protein Y; Ribosome-Associated Protein; Ribosomal AE Familyprotein

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MEIQITTKNCRLDNRTRSYIQRKMGRITRILPQISEFRIELDEEQTRSQADHFILKATLNTGTDVLYAEERAENLLTAAD
RAVEVLNQQIDHAKGKMEVKARNRESIRLSQPDTFSSSKEPLIRRRKQEAKPMTVEEAVNQMNLSGEEYLLFLGPDTKRV
NLLRRFADGKFELVEPVPE

Sequences:

>Translated_179_residues
MEIQITTKNCRLDNRTRSYIQRKMGRITRILPQISEFRIELDEEQTRSQADHFILKATLNTGTDVLYAEERAENLLTAAD
RAVEVLNQQIDHAKGKMEVKARNRESIRLSQPDTFSSSKEPLIRRRKQEAKPMTVEEAVNQMNLSGEEYLLFLGPDTKRV
NLLRRFADGKFELVEPVPE
>Mature_179_residues
MEIQITTKNCRLDNRTRSYIQRKMGRITRILPQISEFRIELDEEQTRSQADHFILKATLNTGTDVLYAEERAENLLTAAD
RAVEVLNQQIDHAKGKMEVKARNRESIRLSQPDTFSSSKEPLIRRRKQEAKPMTVEEAVNQMNLSGEEYLLFLGPDTKRV
NLLRRFADGKFELVEPVPE

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20774; Mature: 20774

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIQITTKNCRLDNRTRSYIQRKMGRITRILPQISEFRIELDEEQTRSQADHFILKATLN
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHEEEEEECC
TGTDVLYAEERAENLLTAADRAVEVLNQQIDHAKGKMEVKARNRESIRLSQPDTFSSSKE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCC
PLIRRRKQEAKPMTVEEAVNQMNLSGEEYLLFLGPDTKRVNLLRRFADGKFELVEPVPE
HHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MEIQITTKNCRLDNRTRSYIQRKMGRITRILPQISEFRIELDEEQTRSQADHFILKATLN
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHEEEEEECC
TGTDVLYAEERAENLLTAADRAVEVLNQQIDHAKGKMEVKARNRESIRLSQPDTFSSSKE
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCC
PLIRRRKQEAKPMTVEEAVNQMNLSGEEYLLFLGPDTKRVNLLRRFADGKFELVEPVPE
HHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA