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The map label for this gene is comFC [H]

Identifier: 57233732

GI number: 57233732

Start: 1316196

End: 1316897

Strand: Direct

Name: comFC [H]

Synonym: DET1458

Alternate gene names: 57233732

Gene position: 1316196-1316897 (Clockwise)

Preceding gene: 57233733

Following gene: 57233731

Centisome position: 89.55

GC content: 52.99

Gene sequence:

>702_bases
ATGAAACTTTGGCATCAATCCCTCAAGGATACCCTTCTTGACTTAGTCTTTCCCCAGCAGTGTCTGGTCTGCGGCAAAGA
AGGCAAGCTGTTCTGTGCCAGATGCAGTGGCAGCCTGAGTTATATTACTCCGCCGGTCTGCTCACTCTGCGGCCATCATA
CCGGAGATGACGGGGTTTGCCCCATGTGTCTTTCCGGCAAAGTCCATCTGGACGGGCTGCGTTCGGTTTTCAACTTTGAA
GGCGGCATTGCCCAAGCTATATATGCCCTTAAATACCACAACCTGCGTTCGGTTGCCCCCTTGCTGGGGGATTTTCTGGC
AGACTACCTGAAACAAAACCCCATTCCGGCTGATATTGTTGTACCCGTACCCCTCCACCCCAGCCGCTTGAAATACCGCG
GCTACAACCAGTCCCTGCTGCTGGCAAGGGAACTCTGCCGCAGAACAGGTTTGAAACTGGATGAACACTGGCTGGAACGT
TCACTGTCATCTGCCCCGCAGGCACGTACCAAAAGCCGTGCTGAGCGTCTGGAAAATGTCAAAAATGCATTTATTTTCAA
ATACCCCACGACAACCGCCCCCAGGGTGATTATAATAGATGATGTAGCAACCACAGGCGCTACCCTGAATGCCTGCGCCG
CCACTCTTAAAGAGGCTGGTGCCCTCAGCGTATGGGGACTGACCATAGCCAGAGAAAGATAG

Upstream 100 bases:

>100_bases
CCGCAACGGGGATATATATATAAACGAACCCATCATAAACGGCAACAACCGCCAGCACTAGGCCGGGAAACGCCAGCTCA
ATCTGCCGGGGGGCAAACAG

Downstream 100 bases:

>100_bases
AGGAGTGTAGAGTATGGAGATTCAGATTACCACCAAGAATTGCCGTCTGGACAACCGCACCCGCAGTTATATCCAACGCA
AAATGGGACGGATAACCCGG

Product: comF family protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKLWHQSLKDTLLDLVFPQQCLVCGKEGKLFCARCSGSLSYITPPVCSLCGHHTGDDGVCPMCLSGKVHLDGLRSVFNFE
GGIAQAIYALKYHNLRSVAPLLGDFLADYLKQNPIPADIVVPVPLHPSRLKYRGYNQSLLLARELCRRTGLKLDEHWLER
SLSSAPQARTKSRAERLENVKNAFIFKYPTTTAPRVIIIDDVATTGATLNACAATLKEAGALSVWGLTIARER

Sequences:

>Translated_233_residues
MKLWHQSLKDTLLDLVFPQQCLVCGKEGKLFCARCSGSLSYITPPVCSLCGHHTGDDGVCPMCLSGKVHLDGLRSVFNFE
GGIAQAIYALKYHNLRSVAPLLGDFLADYLKQNPIPADIVVPVPLHPSRLKYRGYNQSLLLARELCRRTGLKLDEHWLER
SLSSAPQARTKSRAERLENVKNAFIFKYPTTTAPRVIIIDDVATTGATLNACAATLKEAGALSVWGLTIARER
>Mature_233_residues
MKLWHQSLKDTLLDLVFPQQCLVCGKEGKLFCARCSGSLSYITPPVCSLCGHHTGDDGVCPMCLSGKVHLDGLRSVFNFE
GGIAQAIYALKYHNLRSVAPLLGDFLADYLKQNPIPADIVVPVPLHPSRLKYRGYNQSLLLARELCRRTGLKLDEHWLER
SLSSAPQARTKSRAERLENVKNAFIFKYPTTTAPRVIIIDDVATTGATLNACAATLKEAGALSVWGLTIARER

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 25678; Mature: 25678

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLWHQSLKDTLLDLVFPQQCLVCGKEGKLFCARCSGSLSYITPPVCSLCGHHTGDDGVC
CCHHHHHHHHHHHHHHCHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCC
PMCLSGKVHLDGLRSVFNFEGGIAQAIYALKYHNLRSVAPLLGDFLADYLKQNPIPADIV
CCEECCCEEHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEE
VPVPLHPSRLKYRGYNQSLLLARELCRRTGLKLDEHWLERSLSSAPQARTKSRAERLENV
EECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
KNAFIFKYPTTTAPRVIIIDDVATTGATLNACAATLKEAGALSVWGLTIARER
HHCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCC
>Mature Secondary Structure
MKLWHQSLKDTLLDLVFPQQCLVCGKEGKLFCARCSGSLSYITPPVCSLCGHHTGDDGVC
CCHHHHHHHHHHHHHHCHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCC
PMCLSGKVHLDGLRSVFNFEGGIAQAIYALKYHNLRSVAPLLGDFLADYLKQNPIPADIV
CCEECCCEEHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEE
VPVPLHPSRLKYRGYNQSLLLARELCRRTGLKLDEHWLERSLSSAPQARTKSRAERLENV
EECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
KNAFIFKYPTTTAPRVIIIDDVATTGATLNACAATLKEAGALSVWGLTIARER
HHCEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377 [H]