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The map label for this gene is yqgF [C]

Identifier: 57233582

GI number: 57233582

Start: 44619

End: 45020

Strand: Direct

Name: yqgF [C]

Synonym: DET0051

Alternate gene names: 57233582

Gene position: 44619-45020 (Clockwise)

Preceding gene: 57233592

Following gene: 57233581

Centisome position: 3.04

GC content: 51.24

Gene sequence:

>402_bases
GTGGGTGACAAGTGGATAGGGGTGGCTTTGAGCGACCCCTTGCGGATACTGGCTTCGCCTTTGGTTATCCTCCGGCGTGA
CGATGATGCAAAAACAGTGGAAAACATTGAAGCTTTAGTCAAAACCCACCAGCCGGATTTGCTTGTTATCGGCTTGCCGG
TATCTCTGAACGGGACTATCGGGCCTCAGGCGGAAAAGGTAAAAGCCTTCAGCGGGCTGCTCTCACAGAGTTTAAATACC
GAAATTATTTTCCGGGATGAACGCTTTTCCACAGACGAAGCCCGCCGCAAAATGAATGACAGCGGCAAAAACAATAAAAC
TGTCCGGGATGATGCGGCCGCGGCCGCAGTTATTTTGCAGGATTATCTGGACGAGACTAATCCGCCCTGCTTCCAGCCTT
AA

Upstream 100 bases:

>100_bases
CGTGACAAAGCCAAACTGGACGAAGCCCTGCAGGCTGTAAAGGGAATGCTATAAAGAACTGCTGCGGAGGGCTAAAATAG
GCCGTATACTGGCTCTGGAC

Downstream 100 bases:

>100_bases
ATATTCAAGGAGCATACACTTTTGGATAAATCCTTTATATTAAATAAAACCAGTCCCCGCAGTTCTGCCCGCCGCGGCCA
GCTGCTCACAGCCCATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MGDKWIGVALSDPLRILASPLVILRRDDDAKTVENIEALVKTHQPDLLVIGLPVSLNGTIGPQAEKVKAFSGLLSQSLNT
EIIFRDERFSTDEARRKMNDSGKNNKTVRDDAAAAAVILQDYLDETNPPCFQP

Sequences:

>Translated_133_residues
MGDKWIGVALSDPLRILASPLVILRRDDDAKTVENIEALVKTHQPDLLVIGLPVSLNGTIGPQAEKVKAFSGLLSQSLNT
EIIFRDERFSTDEARRKMNDSGKNNKTVRDDAAAAAVILQDYLDETNPPCFQP
>Mature_132_residues
GDKWIGVALSDPLRILASPLVILRRDDDAKTVENIEALVKTHQPDLLVIGLPVSLNGTIGPQAEKVKAFSGLLSQSLNTE
IIFRDERFSTDEARRKMNDSGKNNKTVRDDAAAAAVILQDYLDETNPPCFQP

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

Organism=Escherichia coli, GI1789318, Length=127, Percent_Identity=31.496062992126, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_DEHE1 (Q3ZAE3)

Other databases:

- EMBL:   CP000027
- RefSeq:   YP_180806.1
- ProteinModelPortal:   Q3ZAE3
- SMR:   Q3ZAE3
- STRING:   Q3ZAE3
- GeneID:   3229044
- GenomeReviews:   CP000027_GR
- KEGG:   det:DET0051
- TIGR:   DET0051
- eggNOG:   COG0816
- HOGENOM:   HBG607919
- OMA:   ERSIAMP
- PhylomeDB:   Q3ZAE3
- ProtClustDB:   CLSK836769
- BioCyc:   DETH243164:DET_0051-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 14615; Mature: 14484

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDKWIGVALSDPLRILASPLVILRRDDDAKTVENIEALVKTHQPDLLVIGLPVSLNGTI
CCCCEEEEECCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECEEECCCC
GPQAEKVKAFSGLLSQSLNTEIIFRDERFSTDEARRKMNDSGKNNKTVRDDAAAAAVILQ
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
DYLDETNPPCFQP
HHHHCCCCCCCCC
>Mature Secondary Structure 
GDKWIGVALSDPLRILASPLVILRRDDDAKTVENIEALVKTHQPDLLVIGLPVSLNGTI
CCCEEEEECCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECEEECCCC
GPQAEKVKAFSGLLSQSLNTEIIFRDERFSTDEARRKMNDSGKNNKTVRDDAAAAAVILQ
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
DYLDETNPPCFQP
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA