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The map label for this gene is 57233572

Identifier: 57233572

GI number: 57233572

Start: 1456861

End: 1458696

Strand: Direct

Name: 57233572

Synonym: DET1629

Alternate gene names: NA

Gene position: 1456861-1458696 (Clockwise)

Preceding gene: 57233573

Following gene: 57233705

Centisome position: 99.13

GC content: 53.0

Gene sequence:

>1836_bases
TTGTTGAACTACCCCGAATATATTCTCCATCAGGTTGAAAAACCCGGCCGCTATACCGGCGGGGAGTGGAATTCCGTTTG
CAAGGAATGGGCAAAGACCCCGCTTAAGGTTGCCCTGAGCTTTCCGGATACTTATGAAATAGGCATGTCCAACCTGGCCA
TACCCCTGCTTTATGATATTTTAAACCGCAACCCGGATATTCTGGCCGAAAGGGTTTTCAGCCCCTGGCTGGATATGGAA
AACCTTATCCGTGAGAGAAAACTTGCCTTTGTCAGTCTGGAAAGCGGACACCCCGTAAAAGAGTTTGATATCTTGGGTTT
TTCACTGGGGTATGAGCTTACCTATACCAATATACTTAATATGCTTTCTCTGGCAGGCATACCCATACTTGCTTCCGAAA
GGGGAGGGGATTTTCCGCTGGTGGTTGCCGGCGGCAGCTGCAGCCTCAACCCCGAACCCCTGGCAGATTTTATAGATGCT
TTTGTAATAGGTGATGCCGAAGAGGCTATACAAGACCTGTGCCAAGCCGTCCTTGATGCCAAGAAACAGACCCTTAGTAA
AGACCAAATCTTGCGGGAACTGGCTAAAATCCCCGGTATTTACGTACCCAGCCTGTATAAGGCCGAATATAACCCTGACG
GTATTTTAAAATCCATAATCCCCACCGCACCTGAAGCACCTCCCGTAATAAACCGCCGCATTTTACCTGAGCTACCCCCG
CCAACCGTAAAACCGGTAGTACCGTATATAGAGGTGGTGCAGGACAGGGGAGCAGTGGAAATAAGCCGCGGCTGCAGCCG
GGGCTGCCGTTTCTGCTCTGCCGGTATTATTTACCGCCCGGTCAGGGTGCGCCCGGCGGCAGAGGTTTTAAGTGCCGTTG
AAGGCATACTGGATAACTGCGGTTATGATGAAATTTCGCTGCTTTCGCTGAGCTGTTCGGACTACCCGGGTATTGAAAAT
CTGGTAAAAACCCTGGCGGGAAAATACGCAGACAAACACCTGGCCCTATCACTGCCCAGTTTACGCCTGACCCCGGATTC
GGTCGGGCTGGTAAACGTGCTGGCGGGCGGGCGTAAAAGCGGGCTTACCTTTGCACCCGAAGCAGCCAGTGAGCGTCTCC
AGCGGGTTATAAATAAACTTACCTCCGAAGAAGAGCTGTGTGATACCGCCCGTACTGCCTTTGAAAGCGGCTGGACCAGC
TTCAAGATGTATTTCATGATAGGGCTTCCGACCGAAACTGACGAAGATGCCGCCGCTATCTGCCAGATGGCCGGCAGGGT
AAATTCACTGTCCCGCGGCGCTCCCGGACGCCGCCCCCAGATACGACTGAGCCTGGCCTCATACGTACCCAAAGCCCATA
CCCCATTTCAGTGGGAAGCCCAGCTGGACGAAGAATCCCTCTACCGCAGGGCGGATATAGTAAGGCAGGGGCTGAAACGC
TGGGGAATAAAGGTTTCCTGGTCTGATACCAAAATGAGCCTGCTGGAAGCCGTGTTTTCCAGAGGAGACCGCCGTCTGGG
CAAAGTAATATACACCGCCTGGCAAAAGGGTGCCAAGTTTGATGCCTGGAGTGAGTGTTTCAATTTTACCCTCTGGCAGG
AGGCTTTTGACCAATGCGGTTTAAACCCCTCGTTCTATGCCCACCGCAAACGCCCGCTTGACGAAACACTGCCCTGGGGG
CATATAAATGCCGGGGTAAGTGCCGAATTCCTGAAAAGGGAATATGCCCGCTCAGTGGAAGGGCAGGATACGCCTGACTG
CCGCGAAGGCAAATGCCATGCCTGCGGGCTGGAAAAAGCGGTAGCCGAATGTAACAACCGCCTGCACGGCAAATAA

Upstream 100 bases:

>100_bases
CGAAACCGGCATACCTGTCATAGCCGCCGCAGATGATTTGCTGTTTAAGCTGGAATAAAAGCAAACCATATTTTAACGGA
CTTGTCCCAGAGAGGAACTT

Downstream 100 bases:

>100_bases
ACAGCCTGGTAAAACGCCAATAAAAAAGGGGGCTTTAAAAGCCCCCTTTATGTTTTAACCGGAATATTTCAGCTAAAAAG
TAGCCACCGCAACCACCCGG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MLNYPEYILHQVEKPGRYTGGEWNSVCKEWAKTPLKVALSFPDTYEIGMSNLAIPLLYDILNRNPDILAERVFSPWLDME
NLIRERKLAFVSLESGHPVKEFDILGFSLGYELTYTNILNMLSLAGIPILASERGGDFPLVVAGGSCSLNPEPLADFIDA
FVIGDAEEAIQDLCQAVLDAKKQTLSKDQILRELAKIPGIYVPSLYKAEYNPDGILKSIIPTAPEAPPVINRRILPELPP
PTVKPVVPYIEVVQDRGAVEISRGCSRGCRFCSAGIIYRPVRVRPAAEVLSAVEGILDNCGYDEISLLSLSCSDYPGIEN
LVKTLAGKYADKHLALSLPSLRLTPDSVGLVNVLAGGRKSGLTFAPEAASERLQRVINKLTSEEELCDTARTAFESGWTS
FKMYFMIGLPTETDEDAAAICQMAGRVNSLSRGAPGRRPQIRLSLASYVPKAHTPFQWEAQLDEESLYRRADIVRQGLKR
WGIKVSWSDTKMSLLEAVFSRGDRRLGKVIYTAWQKGAKFDAWSECFNFTLWQEAFDQCGLNPSFYAHRKRPLDETLPWG
HINAGVSAEFLKREYARSVEGQDTPDCREGKCHACGLEKAVAECNNRLHGK

Sequences:

>Translated_611_residues
MLNYPEYILHQVEKPGRYTGGEWNSVCKEWAKTPLKVALSFPDTYEIGMSNLAIPLLYDILNRNPDILAERVFSPWLDME
NLIRERKLAFVSLESGHPVKEFDILGFSLGYELTYTNILNMLSLAGIPILASERGGDFPLVVAGGSCSLNPEPLADFIDA
FVIGDAEEAIQDLCQAVLDAKKQTLSKDQILRELAKIPGIYVPSLYKAEYNPDGILKSIIPTAPEAPPVINRRILPELPP
PTVKPVVPYIEVVQDRGAVEISRGCSRGCRFCSAGIIYRPVRVRPAAEVLSAVEGILDNCGYDEISLLSLSCSDYPGIEN
LVKTLAGKYADKHLALSLPSLRLTPDSVGLVNVLAGGRKSGLTFAPEAASERLQRVINKLTSEEELCDTARTAFESGWTS
FKMYFMIGLPTETDEDAAAICQMAGRVNSLSRGAPGRRPQIRLSLASYVPKAHTPFQWEAQLDEESLYRRADIVRQGLKR
WGIKVSWSDTKMSLLEAVFSRGDRRLGKVIYTAWQKGAKFDAWSECFNFTLWQEAFDQCGLNPSFYAHRKRPLDETLPWG
HINAGVSAEFLKREYARSVEGQDTPDCREGKCHACGLEKAVAECNNRLHGK
>Mature_611_residues
MLNYPEYILHQVEKPGRYTGGEWNSVCKEWAKTPLKVALSFPDTYEIGMSNLAIPLLYDILNRNPDILAERVFSPWLDME
NLIRERKLAFVSLESGHPVKEFDILGFSLGYELTYTNILNMLSLAGIPILASERGGDFPLVVAGGSCSLNPEPLADFIDA
FVIGDAEEAIQDLCQAVLDAKKQTLSKDQILRELAKIPGIYVPSLYKAEYNPDGILKSIIPTAPEAPPVINRRILPELPP
PTVKPVVPYIEVVQDRGAVEISRGCSRGCRFCSAGIIYRPVRVRPAAEVLSAVEGILDNCGYDEISLLSLSCSDYPGIEN
LVKTLAGKYADKHLALSLPSLRLTPDSVGLVNVLAGGRKSGLTFAPEAASERLQRVINKLTSEEELCDTARTAFESGWTS
FKMYFMIGLPTETDEDAAAICQMAGRVNSLSRGAPGRRPQIRLSLASYVPKAHTPFQWEAQLDEESLYRRADIVRQGLKR
WGIKVSWSDTKMSLLEAVFSRGDRRLGKVIYTAWQKGAKFDAWSECFNFTLWQEAFDQCGLNPSFYAHRKRPLDETLPWG
HINAGVSAEFLKREYARSVEGQDTPDCREGKCHACGLEKAVAECNNRLHGK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 67855; Mature: 67855

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYPEYILHQVEKPGRYTGGEWNSVCKEWAKTPLKVALSFPDTYEIGMSNLAIPLLYDI
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHHH
LNRNPDILAERVFSPWLDMENLIRERKLAFVSLESGHPVKEFDILGFSLGYELTYTNILN
HCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCHHHEEEECCCCCHHHHHHHH
MLSLAGIPILASERGGDFPLVVAGGSCSLNPEPLADFIDAFVIGDAEEAIQDLCQAVLDA
HHHHCCCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KKQTLSKDQILRELAKIPGIYVPSLYKAEYNPDGILKSIIPTAPEAPPVINRRILPELPP
HHHHCCHHHHHHHHHHCCCEECCCHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PTVKPVVPYIEVVQDRGAVEISRGCSRGCRFCSAGIIYRPVRVRPAAEVLSAVEGILDNC
CCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHC
GYDEISLLSLSCSDYPGIENLVKTLAGKYADKHLALSLPSLRLTPDSVGLVNVLAGGRKS
CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCHHHHHCCCCCC
GLTFAPEAASERLQRVINKLTSEEELCDTARTAFESGWTSFKMYFMIGLPTETDEDAAAI
CCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHH
CQMAGRVNSLSRGAPGRRPQIRLSLASYVPKAHTPFQWEAQLDEESLYRRADIVRQGLKR
HHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
WGIKVSWSDTKMSLLEAVFSRGDRRLGKVIYTAWQKGAKFDAWSECFNFTLWQEAFDQCG
CCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
LNPSFYAHRKRPLDETLPWGHINAGVSAEFLKREYARSVEGQDTPDCREGKCHACGLEKA
CCCCHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
VAECNNRLHGK
HHHHHHCCCCC
>Mature Secondary Structure
MLNYPEYILHQVEKPGRYTGGEWNSVCKEWAKTPLKVALSFPDTYEIGMSNLAIPLLYDI
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHHH
LNRNPDILAERVFSPWLDMENLIRERKLAFVSLESGHPVKEFDILGFSLGYELTYTNILN
HCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCHHHEEEECCCCCHHHHHHHH
MLSLAGIPILASERGGDFPLVVAGGSCSLNPEPLADFIDAFVIGDAEEAIQDLCQAVLDA
HHHHCCCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KKQTLSKDQILRELAKIPGIYVPSLYKAEYNPDGILKSIIPTAPEAPPVINRRILPELPP
HHHHCCHHHHHHHHHHCCCEECCCHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PTVKPVVPYIEVVQDRGAVEISRGCSRGCRFCSAGIIYRPVRVRPAAEVLSAVEGILDNC
CCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHC
GYDEISLLSLSCSDYPGIENLVKTLAGKYADKHLALSLPSLRLTPDSVGLVNVLAGGRKS
CCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCHHHHHCCCCCC
GLTFAPEAASERLQRVINKLTSEEELCDTARTAFESGWTSFKMYFMIGLPTETDEDAAAI
CCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHH
CQMAGRVNSLSRGAPGRRPQIRLSLASYVPKAHTPFQWEAQLDEESLYRRADIVRQGLKR
HHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHH
WGIKVSWSDTKMSLLEAVFSRGDRRLGKVIYTAWQKGAKFDAWSECFNFTLWQEAFDQCG
CCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
LNPSFYAHRKRPLDETLPWGHINAGVSAEFLKREYARSVEGQDTPDCREGKCHACGLEKA
CCCCHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
VAECNNRLHGK
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]