| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57233573
Identifier: 57233573
GI number: 57233573
Start: 1456045
End: 1456818
Strand: Direct
Name: 57233573
Synonym: DET1628
Alternate gene names: NA
Gene position: 1456045-1456818 (Clockwise)
Preceding gene: 57233585
Following gene: 57233572
Centisome position: 99.07
GC content: 50.13
Gene sequence:
>774_bases ATGAGCTACACCGAAGAAACCAACAGCATCACTTTTCTAGGTACAGGCGGGGCCAGATTTATGGTCAGCCGCCAGATACT GGCTTCGGGCGGAATCTGGCTGAACCTTGACGGCAAACGGTTCCTGATTGACCCCGGCCCAGGCAGTATTGTGCAGGTAT GCCGTCTGGGCTTAAACCCGGAAAACCTGAGCGCTATCCTTTTGTCCCACCGCCATCTGGACCACTCCGGTGATGTAAAC GTAATGATAGAGGCCATGACCCAGGGCGGCTTTAACAAAAACGGCCATTTTCTGGCCCCTGAAGATGCCCTGGATAACGA ACCGGTTATATACTCGTATCTAAGGCCGTTTCTGAATGACCTGACTGTGCTTGAGGAAGAACACGAATACAATCTGGACG GGATAAAGGTTTTCACTACCCGGCGTCATCAGCACCCGGTGGAAACCTACGGGTTTATATTTGAATCTTGCGGAAAGCGC ATAGGCTACGTAAGTGATACCCGCTACTTTGAAGATATGCCCCAGATTTATGCCGGCTGTGACGTACTGATAATAAATGT TGTTCTTAGGGAATCTATAGAACGCATTTATCATTTGAGCATAGCGGATGCTGCCAAACTTATCAGCGGGGCTAAACCCA AAACAGCCATACTTACCCACTTCGGACTGCAGCTTTTCCGGGCAGACCCGGCCAGGATGGCAGCCAAAGTTGAAACCGAA ACCGGCATACCTGTCATAGCCGCCGCAGATGATTTGCTGTTTAAGCTGGAATAA
Upstream 100 bases:
>100_bases CGTACTTTCTACACAGGCTTTTGTAACTAACACCCCAAGATAGCCAAAATATTTTCTGAATTGGCATTTGGCTAAATAAT GTCTATACTAAGTGTCTGAT
Downstream 100 bases:
>100_bases AAGCAAACCATATTTTAACGGACTTGTCCCAGAGAGGAACTTTTGTTGAACTACCCCGAATATATTCTCCATCAGGTTGA AAAACCCGGCCGCTATACCG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSYTEETNSITFLGTGGARFMVSRQILASGGIWLNLDGKRFLIDPGPGSIVQVCRLGLNPENLSAILLSHRHLDHSGDVN VMIEAMTQGGFNKNGHFLAPEDALDNEPVIYSYLRPFLNDLTVLEEEHEYNLDGIKVFTTRRHQHPVETYGFIFESCGKR IGYVSDTRYFEDMPQIYAGCDVLIINVVLRESIERIYHLSIADAAKLISGAKPKTAILTHFGLQLFRADPARMAAKVETE TGIPVIAAADDLLFKLE
Sequences:
>Translated_257_residues MSYTEETNSITFLGTGGARFMVSRQILASGGIWLNLDGKRFLIDPGPGSIVQVCRLGLNPENLSAILLSHRHLDHSGDVN VMIEAMTQGGFNKNGHFLAPEDALDNEPVIYSYLRPFLNDLTVLEEEHEYNLDGIKVFTTRRHQHPVETYGFIFESCGKR IGYVSDTRYFEDMPQIYAGCDVLIINVVLRESIERIYHLSIADAAKLISGAKPKTAILTHFGLQLFRADPARMAAKVETE TGIPVIAAADDLLFKLE >Mature_256_residues SYTEETNSITFLGTGGARFMVSRQILASGGIWLNLDGKRFLIDPGPGSIVQVCRLGLNPENLSAILLSHRHLDHSGDVNV MIEAMTQGGFNKNGHFLAPEDALDNEPVIYSYLRPFLNDLTVLEEEHEYNLDGIKVFTTRRHQHPVETYGFIFESCGKRI GYVSDTRYFEDMPQIYAGCDVLIINVVLRESIERIYHLSIADAAKLISGAKPKTAILTHFGLQLFRADPARMAAKVETET GIPVIAAADDLLFKLE
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28615; Mature: 28484
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTEETNSITFLGTGGARFMVSRQILASGGIWLNLDGKRFLIDPGPGSIVQVCRLGLNP CCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHHHHHCCCCH ENLSAILLSHRHLDHSGDVNVMIEAMTQGGFNKNGHFLAPEDALDNEPVIYSYLRPFLND HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH LTVLEEEHEYNLDGIKVFTTRRHQHPVETYGFIFESCGKRIGYVSDTRYFEDMPQIYAGC HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC DVLIINVVLRESIERIYHLSIADAAKLISGAKPKTAILTHFGLQLFRADPARMAAKVETE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEEEECC TGIPVIAAADDLLFKLE CCCEEEEECCCEEEEEC >Mature Secondary Structure SYTEETNSITFLGTGGARFMVSRQILASGGIWLNLDGKRFLIDPGPGSIVQVCRLGLNP CCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHHHHHCCCCH ENLSAILLSHRHLDHSGDVNVMIEAMTQGGFNKNGHFLAPEDALDNEPVIYSYLRPFLND HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHH LTVLEEEHEYNLDGIKVFTTRRHQHPVETYGFIFESCGKRIGYVSDTRYFEDMPQIYAGC HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC DVLIINVVLRESIERIYHLSIADAAKLISGAKPKTAILTHFGLQLFRADPARMAAKVETE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEEEECC TGIPVIAAADDLLFKLE CCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]