Click here to switch to the map view.

The map label for this gene is 57233554

Identifier: 57233554

GI number: 57233554

Start: 79177

End: 79710

Strand: Direct

Name: 57233554

Synonym: DET0080

Alternate gene names: NA

Gene position: 79177-79710 (Clockwise)

Preceding gene: 57233557

Following gene: 57235096

Centisome position: 5.39

GC content: 34.83

Gene sequence:

>534_bases
ATGGGAAACGAGCGTGATATGGATTTAAATAACATTAAGCAGCAGGAAGATAGAATTAATACCTACGGGGAAGAGTATGT
AAATCTCTCATTAATGAGTATAATAACACTTATTGGAACCATAGCAATGCGAAACTACAAATATACTATGGGTGAGTATA
GTGAAAACCTAACACCGAATGAGAGCAGTTTACTTATGGAAGTATATTTTAGAGAAGAAATCGGAATCATTGACGCATGC
AGGGCAACTGGTTTAAGCACTGAGAATGTCTTGCATTTATTCTCTAATATATATAACAAAGGCTACCTAAAGAAAGTAAA
AAAGGGTAAGAAAACTTATTATAGTATCGCAGATAACCCACCGGGGGATTGGCAGGATGTTTTAGAAGGTTATCAAAAAG
CAACAGATGCTTGTAACTATTTTTGTAAAGACTTAAGTGATGAAAAGAAGCAAGAAATTTGGGATATGCTTTTGGATATA
AGGCATAATGTGAATGATTACCATGTTCGCATGTCAGGCATTAGCTTTCTCTAA

Upstream 100 bases:

>100_bases
AAGTTTACTAAAACTTTTATTGAAAATTTATTAAATTAGAATATAATAGTCACAAAACGAGTTAGTTGGAGAATTAGATT
GGGAGGGACGTGAGTAAAAA

Downstream 100 bases:

>100_bases
ACTGCAGCAAACCCCATCACCATTGCTTAAGGGAGAGACCAACTCTCCCCCGTCTCCCCATTAATAGCCAGAAATTACCT
TCACAAACCCTACCCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MGNERDMDLNNIKQQEDRINTYGEEYVNLSLMSIITLIGTIAMRNYKYTMGEYSENLTPNESSLLMEVYFREEIGIIDAC
RATGLSTENVLHLFSNIYNKGYLKKVKKGKKTYYSIADNPPGDWQDVLEGYQKATDACNYFCKDLSDEKKQEIWDMLLDI
RHNVNDYHVRMSGISFL

Sequences:

>Translated_177_residues
MGNERDMDLNNIKQQEDRINTYGEEYVNLSLMSIITLIGTIAMRNYKYTMGEYSENLTPNESSLLMEVYFREEIGIIDAC
RATGLSTENVLHLFSNIYNKGYLKKVKKGKKTYYSIADNPPGDWQDVLEGYQKATDACNYFCKDLSDEKKQEIWDMLLDI
RHNVNDYHVRMSGISFL
>Mature_176_residues
GNERDMDLNNIKQQEDRINTYGEEYVNLSLMSIITLIGTIAMRNYKYTMGEYSENLTPNESSLLMEVYFREEIGIIDACR
ATGLSTENVLHLFSNIYNKGYLKKVKKGKKTYYSIADNPPGDWQDVLEGYQKATDACNYFCKDLSDEKKQEIWDMLLDIR
HNVNDYHVRMSGISFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20589; Mature: 20457

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNERDMDLNNIKQQEDRINTYGEEYVNLSLMSIITLIGTIAMRNYKYTMGEYSENLTPN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
ESSLLMEVYFREEIGIIDACRATGLSTENVLHLFSNIYNKGYLKKVKKGKKTYYSIADNP
HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHEEECCCCC
PGDWQDVLEGYQKATDACNYFCKDLSDEKKQEIWDMLLDIRHNVNDYHVRMSGISFL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure 
GNERDMDLNNIKQQEDRINTYGEEYVNLSLMSIITLIGTIAMRNYKYTMGEYSENLTPN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
ESSLLMEVYFREEIGIIDACRATGLSTENVLHLFSNIYNKGYLKKVKKGKKTYYSIADNP
HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHEEECCCCC
PGDWQDVLEGYQKATDACNYFCKDLSDEKKQEIWDMLLDIRHNVNDYHVRMSGISFL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA