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The map label for this gene is yqgE [C]

Identifier: 38234900

GI number: 38234900

Start: 2470168

End: 2470764

Strand: Reverse

Name: yqgE [C]

Synonym: DIP2367

Alternate gene names: 38234900

Gene position: 2470764-2470168 (Counterclockwise)

Preceding gene: 38234901

Following gene: 38234899

Centisome position: 99.28

GC content: 56.95

Gene sequence:

>597_bases
ATGTTTGCGGATCGACTCTTTAACGCCATGGAGCGCAATGAACCCGCGCCGGGCATGGTGCTAGTTGCTGCACCTTCGAT
GGAATCGGAGGATTTTGCGCGCAGTGTCATTTTGATTATCGAGCACAGTGAATATGCCACCTTTGGTGTCAATCTTGCCT
CGCGTAGCGACGTCGCCGTGTTCAACGTGATACCTGAGTGGGTGCCATGTGTGACCAAGCCGCAGGCGCTGTATATCGGA
GGTCCGTTAAACCAGCAGTCTGTGGTGGGTGTTGGCGTGACCGCGCAGGGCGTGGATGCGGCCCGTGTAGACAATCTCAC
TCGCCTTGCTAACCGGTTGGTGATGGTGAATTTGGGTGCGGACCCAGAAGAGATAAAGCCGTTGGTGTCGGGTATGCGCC
TGTTTGCTGGTCATGCAGAGTGGGCACCTGGCCAGCTGGCTCAGGAGATTGAGAACGGTGACTGGTTTGTGGCTCCGGCG
CTCCCCTCGGACGTGACGGCACCAGGAAGCGTTGATGTGTGGGGCGATGTGATGCGTCGTCAGCCCATGCCGTTGCCGTT
GTATTCCACGTTCCCAGTCAATGTGGGAGAAAACTAA

Upstream 100 bases:

>100_bases
ACAAGCATGGAAATTCTTAAAGGAACTGCGCTTAGAGCGTGGCCCCCTAGAACGTGAAGACGCGATTTTGGAATTGAAGA
AATGGTGGTACGAACAGTAA

Downstream 100 bases:

>100_bases
GTGGTTTCACGTGAAACATCGAAAAAACGAACGGAGATTCTCGGCGGAATAAAAGACTCATGGGCGGTGGCCCTCGGTCT
CGTCCCCCTCGGCCTCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MFADRLFNAMERNEPAPGMVLVAAPSMESEDFARSVILIIEHSEYATFGVNLASRSDVAVFNVIPEWVPCVTKPQALYIG
GPLNQQSVVGVGVTAQGVDAARVDNLTRLANRLVMVNLGADPEEIKPLVSGMRLFAGHAEWAPGQLAQEIENGDWFVAPA
LPSDVTAPGSVDVWGDVMRRQPMPLPLYSTFPVNVGEN

Sequences:

>Translated_198_residues
MFADRLFNAMERNEPAPGMVLVAAPSMESEDFARSVILIIEHSEYATFGVNLASRSDVAVFNVIPEWVPCVTKPQALYIG
GPLNQQSVVGVGVTAQGVDAARVDNLTRLANRLVMVNLGADPEEIKPLVSGMRLFAGHAEWAPGQLAQEIENGDWFVAPA
LPSDVTAPGSVDVWGDVMRRQPMPLPLYSTFPVNVGEN
>Mature_198_residues
MFADRLFNAMERNEPAPGMVLVAAPSMESEDFARSVILIIEHSEYATFGVNLASRSDVAVFNVIPEWVPCVTKPQALYIG
GPLNQQSVVGVGVTAQGVDAARVDNLTRLANRLVMVNLGADPEEIKPLVSGMRLFAGHAEWAPGQLAQEIENGDWFVAPA
LPSDVTAPGSVDVWGDVMRRQPMPLPLYSTFPVNVGEN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003774 [H]

Pfam domain/function: PF02622 DUF179 [H]

EC number: NA

Molecular weight: Translated: 21373; Mature: 21373

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFADRLFNAMERNEPAPGMVLVAAPSMESEDFARSVILIIEHSEYATFGVNLASRSDVAV
CCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCEEEEEEECCCEEEEEEEECCCCCEEE
FNVIPEWVPCVTKPQALYIGGPLNQQSVVGVGVTAQGVDAARVDNLTRLANRLVMVNLGA
EECCHHHHCCCCCCCEEEEECCCCCCCEEEECCEECCCCHHHHHHHHHHHCEEEEEECCC
DPEEIKPLVSGMRLFAGHAEWAPGQLAQEIENGDWFVAPALPSDVTAPGSVDVWGDVMRR
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHC
QPMPLPLYSTFPVNVGEN
CCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MFADRLFNAMERNEPAPGMVLVAAPSMESEDFARSVILIIEHSEYATFGVNLASRSDVAV
CCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCEEEEEEECCCEEEEEEEECCCCCEEE
FNVIPEWVPCVTKPQALYIGGPLNQQSVVGVGVTAQGVDAARVDNLTRLANRLVMVNLGA
EECCHHHHCCCCCCCEEEEECCCCCCCEEEECCEECCCCHHHHHHHHHHHCEEEEEECCC
DPEEIKPLVSGMRLFAGHAEWAPGQLAQEIENGDWFVAPALPSDVTAPGSVDVWGDVMRR
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHC
QPMPLPLYSTFPVNVGEN
CCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]