| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is trpG [H]
Identifier: 38234887
GI number: 38234887
Start: 2459588
End: 2460232
Strand: Direct
Name: trpG [H]
Synonym: DIP2353
Alternate gene names: 38234887
Gene position: 2459588-2460232 (Clockwise)
Preceding gene: 38234886
Following gene: 38234888
Centisome position: 98.83
GC content: 57.98
Gene sequence:
>645_bases ATGAAAACTCAGCAAGCCCATGTCGTGCTCCTTGATAACCACGACTCGTTTGTTTATAACTTGGTGGACGCTTTTGCCGT CGCCGGCTACCACTGCACAGTCCTACGCAATAGCGTCACAGTGACAGAAGTTCTTGACCTAGAACCCGCTCTCATTTGTC TCTCCCCAGGACCTGGTCACCCCCGCGAAGCCGGCTGCATGATGGACCTCATCGGGGCGTCGATAGGCACCATCCCGATC CTCGGCATCTGCCTCGGCTTCCAAGCACTCCTCGAACACCACGGTGGGGAAGTCCGCCCCTGCGGCCCCGTCCACGGCAC CACCGACCTCATGACGCTCACCAACCCAGACCATCCACTGTTCGCAGGACTTAGCATCGACGCCACACCCAACAACAATT TCCACGGAACACAGGTGCCAATCGCACGCTATCACTCCCTAGGATGCACCGACATCCCACCAAACATGGTGAGCCTAGGA ACCTGCGACTCCGCCATCGGACCTGTCACCATGGCCGCCGAAACCCACGACGGCGAGGAGCAGACCACCAGCATTGGATT GCAATTCCACCCCGAATCCGTACTAAGCCCCAGCGGGCCCATCATCCTTGAACGATGCGTCGATAAGCTGCTAGCCAACA AATAA
Upstream 100 bases:
>100_bases CTATTCCACAATCAGAGGCCGATGAAACACTCCATAAGGCCTATGCCGTTTTGCATGCCATTGCATTGGCGGCCGGAAAG GATCTGGAGGTGGTTCGCTA
Downstream 100 bases:
>100_bases GAAAGACCACAACCATGACAAGCGACAAAACACTCAACAACCTCATCGCCTACCTCGACAACCCACACCCCACCGTCGAA CAAGCCATTGAAGTATTCAC
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Anthranilate synthase component II; Glutamine amido-transferase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKTQQAHVVLLDNHDSFVYNLVDAFAVAGYHCTVLRNSVTVTEVLDLEPALICLSPGPGHPREAGCMMDLIGASIGTIPI LGICLGFQALLEHHGGEVRPCGPVHGTTDLMTLTNPDHPLFAGLSIDATPNNNFHGTQVPIARYHSLGCTDIPPNMVSLG TCDSAIGPVTMAAETHDGEEQTTSIGLQFHPESVLSPSGPIILERCVDKLLANK
Sequences:
>Translated_214_residues MKTQQAHVVLLDNHDSFVYNLVDAFAVAGYHCTVLRNSVTVTEVLDLEPALICLSPGPGHPREAGCMMDLIGASIGTIPI LGICLGFQALLEHHGGEVRPCGPVHGTTDLMTLTNPDHPLFAGLSIDATPNNNFHGTQVPIARYHSLGCTDIPPNMVSLG TCDSAIGPVTMAAETHDGEEQTTSIGLQFHPESVLSPSGPIILERCVDKLLANK >Mature_214_residues MKTQQAHVVLLDNHDSFVYNLVDAFAVAGYHCTVLRNSVTVTEVLDLEPALICLSPGPGHPREAGCMMDLIGASIGTIPI LGICLGFQALLEHHGGEVRPCGPVHGTTDLMTLTNPDHPLFAGLSIDATPNNNFHGTQVPIARYHSLGCTDIPPNMVSLG TCDSAIGPVTMAAETHDGEEQTTSIGLQFHPESVLSPSGPIILERCVDKLLANK
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=207, Percent_Identity=35.7487922705314, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1789760, Length=202, Percent_Identity=37.1287128712871, Blast_Score=100, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6322638, Length=211, Percent_Identity=33.6492890995261, Blast_Score=104, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324361, Length=225, Percent_Identity=27.1111111111111, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 22677; Mature: 22677
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQQAHVVLLDNHDSFVYNLVDAFAVAGYHCTVLRNSVTVTEVLDLEPALICLSPGPGH CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCEEEEECCCCCC PREAGCMMDLIGASIGTIPILGICLGFQALLEHHGGEVRPCGPVHGTTDLMTLTNPDHPL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCE FAGLSIDATPNNNFHGTQVPIARYHSLGCTDIPPNMVSLGTCDSAIGPVTMAAETHDGEE EEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCC QTTSIGLQFHPESVLSPSGPIILERCVDKLLANK HHEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKTQQAHVVLLDNHDSFVYNLVDAFAVAGYHCTVLRNSVTVTEVLDLEPALICLSPGPGH CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCEEEEECCCCCC PREAGCMMDLIGASIGTIPILGICLGFQALLEHHGGEVRPCGPVHGTTDLMTLTNPDHPL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCE FAGLSIDATPNNNFHGTQVPIARYHSLGCTDIPPNMVSLGTCDSAIGPVTMAAETHDGEE EEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCC QTTSIGLQFHPESVLSPSGPIILERCVDKLLANK HHEEEEEEECCHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3808947; 12948626 [H]