| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is trpE [H]
Identifier: 38234886
GI number: 38234886
Start: 2458035
End: 2459588
Strand: Direct
Name: trpE [H]
Synonym: DIP2352
Alternate gene names: 38234886
Gene position: 2458035-2459588 (Clockwise)
Preceding gene: 38234885
Following gene: 38234887
Centisome position: 98.77
GC content: 52.9
Gene sequence:
>1554_bases ATGGCAGATTTCCATGCATCCGCCCGCGAGGTGCGCTATCACGAGGATGCCGCCGACCTCTTTCATCATCTTGGCGGGAC CTCGGCTAGTGACTCCGTTCTTTTAGAGTCCGCAGACATTAAATCCAAGAAGAACACCACATCCATGGCAGTACTTCAAT CAGCGGTTCGCGTGACGTGCATGGGGCAAACCGTGACCGCCACGCCCCTAACATCTACGGGCCATACAATGGTGGCGCGC CTACAGGAGCACTTTGGCACGAGCGGCACGAAATTTAGTTTCCGCCGCTCCGAGCTTCACGACGAACGCCAGCGCCTCCT TGACACCAATAACGCCGAGATTCTTCGCCTCCTACAGTGTGAGGCCGGCTATTCCGGTGAGCAGTTACCACTTCTTGCCG GCGGTTTCGCCTTCGACTACGTGGAGACATTTGAGCAATTACCTCCTGTACCGGTAGGGGATAATTCTTATCCCGATTAC CAGTTTGTGGTGGCAGAAACAGTGCTGGTGACCGATCATCTCAAGCGCAGTGCGGTTATCGAGGGCGTGTCCATTGATCC AAGCGAGTTGGAGGATCGACTAGATTCCCTTGTTGCCACGATTGACAGCCATGAAACAGTCGAGGAATGTCCCGCGACCA CGGCAACCAATGAGATATTGACTGTGCGTGCCGATATTTCTGATGTGGATTTTTGCCAAAGCGTAAGCGCACTGCAGGAC AATATCCAGGCGGGAGACATCTATCAGGTGGTTCCAGCACGCAGCTTTAGCGCGCCCTGTGAGAGTGCTTATGCAGCTTA TAGACACTTGCGCACAATCAATCCCAGCCCCTATATGTTTTACGTGCGCGGCATTACCCCCATTTCATGCAATTCAAATA AAACATATGAGCTGATAGGAGCGTCGCCGGAGTCTAATCTCAAGTTCGATTCCAGAACACGCGAGATACAATTGTATCCG ATCGCCGGTACCCGGCCACGGGGACTTAATCCCGACGGGAGTATTAATCACGAACTCGACATTCGTGCCGAGCTGGATAT GCGAACTAACGTCAAGGAAATCGCCGAACATACTATGCTAGTTGATCTTGCACGCAATGATCTTGCACGTGTTTCATTGC CCACAACACGTCGCGTTGCAGAGTTATTGCAGGTAGATCGCTACTCCCGGGTGATGCATCTCGTTAGCCGTGTGGTAGCT ACGCTGGATCCAGAGTTCGACGCTATTAACGCCTACCGTGCCTGCATGAACATGGGAACGCTAACCGGAGCACCAAAATT GCGCGCAATTGAATTACTGCGAGGTGTGGAAGCTAAACGTCGCGGTTCCTATGGTGGTGCGGTTGGATACCTTCAAGGAG ATGGCTCCATGGATACTTGCATTGTCATTCGTTCCGCCTTTATTCAGGATGGGGTAGCGGTGGTACAGGCCGGTGCCGGA GTGGTGCGGGATTCTATTCCACAATCAGAGGCCGATGAAACACTCCATAAGGCCTATGCCGTTTTGCATGCCATTGCATT GGCGGCCGGAAAGGATCTGGAGGTGGTTCGCTAA
Upstream 100 bases:
>100_bases CTACCGAGGATCCAGCAACCTCACCAGTCACGGATCCTCATGTCGCCGAAACCCTCGTCACAATGATCGCTGAGTCCAAT GCACGAGAGGGAGTCTAAGC
Downstream 100 bases:
>100_bases TGAAAACTCAGCAAGCCCATGTCGTGCTCCTTGATAACCACGACTCGTTTGTTTATAACTTGGTGGACGCTTTTGCCGTC GCCGGCTACCACTGCACAGT
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MADFHASAREVRYHEDAADLFHHLGGTSASDSVLLESADIKSKKNTTSMAVLQSAVRVTCMGQTVTATPLTSTGHTMVAR LQEHFGTSGTKFSFRRSELHDERQRLLDTNNAEILRLLQCEAGYSGEQLPLLAGGFAFDYVETFEQLPPVPVGDNSYPDY QFVVAETVLVTDHLKRSAVIEGVSIDPSELEDRLDSLVATIDSHETVEECPATTATNEILTVRADISDVDFCQSVSALQD NIQAGDIYQVVPARSFSAPCESAYAAYRHLRTINPSPYMFYVRGITPISCNSNKTYELIGASPESNLKFDSRTREIQLYP IAGTRPRGLNPDGSINHELDIRAELDMRTNVKEIAEHTMLVDLARNDLARVSLPTTRRVAELLQVDRYSRVMHLVSRVVA TLDPEFDAINAYRACMNMGTLTGAPKLRAIELLRGVEAKRRGSYGGAVGYLQGDGSMDTCIVIRSAFIQDGVAVVQAGAG VVRDSIPQSEADETLHKAYAVLHAIALAAGKDLEVVR
Sequences:
>Translated_517_residues MADFHASAREVRYHEDAADLFHHLGGTSASDSVLLESADIKSKKNTTSMAVLQSAVRVTCMGQTVTATPLTSTGHTMVAR LQEHFGTSGTKFSFRRSELHDERQRLLDTNNAEILRLLQCEAGYSGEQLPLLAGGFAFDYVETFEQLPPVPVGDNSYPDY QFVVAETVLVTDHLKRSAVIEGVSIDPSELEDRLDSLVATIDSHETVEECPATTATNEILTVRADISDVDFCQSVSALQD NIQAGDIYQVVPARSFSAPCESAYAAYRHLRTINPSPYMFYVRGITPISCNSNKTYELIGASPESNLKFDSRTREIQLYP IAGTRPRGLNPDGSINHELDIRAELDMRTNVKEIAEHTMLVDLARNDLARVSLPTTRRVAELLQVDRYSRVMHLVSRVVA TLDPEFDAINAYRACMNMGTLTGAPKLRAIELLRGVEAKRRGSYGGAVGYLQGDGSMDTCIVIRSAFIQDGVAVVQAGAG VVRDSIPQSEADETLHKAYAVLHAIALAAGKDLEVVR >Mature_516_residues ADFHASAREVRYHEDAADLFHHLGGTSASDSVLLESADIKSKKNTTSMAVLQSAVRVTCMGQTVTATPLTSTGHTMVARL QEHFGTSGTKFSFRRSELHDERQRLLDTNNAEILRLLQCEAGYSGEQLPLLAGGFAFDYVETFEQLPPVPVGDNSYPDYQ FVVAETVLVTDHLKRSAVIEGVSIDPSELEDRLDSLVATIDSHETVEECPATTATNEILTVRADISDVDFCQSVSALQDN IQAGDIYQVVPARSFSAPCESAYAAYRHLRTINPSPYMFYVRGITPISCNSNKTYELIGASPESNLKFDSRTREIQLYPI AGTRPRGLNPDGSINHELDIRAELDMRTNVKEIAEHTMLVDLARNDLARVSLPTTRRVAELLQVDRYSRVMHLVSRVVAT LDPEFDAINAYRACMNMGTLTGAPKLRAIELLRGVEAKRRGSYGGAVGYLQGDGSMDTCIVIRSAFIQDGVAVVQAGAGV VRDSIPQSEADETLHKAYAVLHAIALAAGKDLEVVR
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=508, Percent_Identity=47.244094488189, Blast_Score=421, Evalue=1e-119, Organism=Escherichia coli, GI1788114, Length=384, Percent_Identity=28.3854166666667, Blast_Score=155, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6320935, Length=387, Percent_Identity=36.9509043927649, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6324361, Length=347, Percent_Identity=25.6484149855908, Blast_Score=98, Evalue=3e-21,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 56584; Mature: 56453
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFHASAREVRYHEDAADLFHHLGGTSASDSVLLESADIKSKKNTTSMAVLQSAVRVTC CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHEEE MGQTVTATPLTSTGHTMVARLQEHFGTSGTKFSFRRSELHDERQRLLDTNNAEILRLLQC ECCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHH EAGYSGEQLPLLAGGFAFDYVETFEQLPPVPVGDNSYPDYQFVVAETVLVTDHLKRSAVI CCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC EGVSIDPSELEDRLDSLVATIDSHETVEECPATTATNEILTVRADISDVDFCQSVSALQD CCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH NIQAGDIYQVVPARSFSAPCESAYAAYRHLRTINPSPYMFYVRGITPISCNSNKTYELIG CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCEEEEEE ASPESNLKFDSRTREIQLYPIAGTRPRGLNPDGSINHELDIRAELDMRTNVKEIAEHTML CCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH VDLARNDLARVSLPTTRRVAELLQVDRYSRVMHLVSRVVATLDPEFDAINAYRACMNMGT HHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC LTGAPKLRAIELLRGVEAKRRGSYGGAVGYLQGDGSMDTCIVIRSAFIQDGVAVVQAGAG CCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCCC VVRDSIPQSEADETLHKAYAVLHAIALAAGKDLEVVR HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADFHASAREVRYHEDAADLFHHLGGTSASDSVLLESADIKSKKNTTSMAVLQSAVRVTC CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHEEE MGQTVTATPLTSTGHTMVARLQEHFGTSGTKFSFRRSELHDERQRLLDTNNAEILRLLQC ECCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHH EAGYSGEQLPLLAGGFAFDYVETFEQLPPVPVGDNSYPDYQFVVAETVLVTDHLKRSAVI CCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC EGVSIDPSELEDRLDSLVATIDSHETVEECPATTATNEILTVRADISDVDFCQSVSALQD CCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH NIQAGDIYQVVPARSFSAPCESAYAAYRHLRTINPSPYMFYVRGITPISCNSNKTYELIG CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCEEEEEE ASPESNLKFDSRTREIQLYPIAGTRPRGLNPDGSINHELDIRAELDMRTNVKEIAEHTML CCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH VDLARNDLARVSLPTTRRVAELLQVDRYSRVMHLVSRVVATLDPEFDAINAYRACMNMGT HHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC LTGAPKLRAIELLRGVEAKRRGSYGGAVGYLQGDGSMDTCIVIRSAFIQDGVAVVQAGAG CCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCCC VVRDSIPQSEADETLHKAYAVLHAIALAAGKDLEVVR HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3808947; 2263476; 12948626; 3609747; 3667535 [H]